Gene : Thecc1EG034310 T. cacao v1.1
Defline:  (1 of 5) 4.1.1.17 - Ornithine decarboxylase / L-ornithine carboxy-lyase Genomic Order:  508
Name:  ? Thecc1EG034310 Secondary Identifier:  ? PAC:27459473
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao POLYAMINSYN3-PWY Theobroma cacao pathologic  
Tcacao PWY-46 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034310 0.5kb upstream 0.5kb upstream 2201 true scaffold_8: 2400315-2402515 Theobroma cacao
Thecc1EG034310 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2402016-2402515 Theobroma cacao
Thecc1EG034310 0.5kb downstream 0.5kb downstream 2201 true scaffold_8: 2399815-2402015 Theobroma cacao
Thecc1EG034310 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2399815-2400314 Theobroma cacao
Thecc1EG034310 1.0kb upstream 1.0kb upstream 2701 true scaffold_8: 2400315-2403015 Theobroma cacao
Thecc1EG034310 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2402016-2403015 Theobroma cacao
Thecc1EG034310 1.0kb downstream 1.0kb downstream 2701 true scaffold_8: 2399315-2402015 Theobroma cacao
Thecc1EG034310 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2399315-2400314 Theobroma cacao
Thecc1EG034310 2.0kb upstream 2.0kb upstream 3701 true scaffold_8: 2400315-2404015 Theobroma cacao
Thecc1EG034310 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2402016-2404015 Theobroma cacao
Thecc1EG034310 2.0kb downstream 2.0kb downstream 3701 true scaffold_8: 2398315-2402015 Theobroma cacao
Thecc1EG034310 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2398315-2400314 Theobroma cacao
Thecc1EG034310 5.0kb upstream 5.0kb upstream 6701 true scaffold_8: 2400315-2407015 Theobroma cacao
Thecc1EG034310 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2402016-2407015 Theobroma cacao
Thecc1EG034310 5.0kb downstream 5.0kb downstream 6701 true scaffold_8: 2395315-2402015 Theobroma cacao
Thecc1EG034310 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2395315-2400314 Theobroma cacao
Thecc1EG034310 10.0kb upstream 10.0kb upstream 11701 true scaffold_8: 2400315-2412015 Theobroma cacao
Thecc1EG034310 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2402016-2412015 Theobroma cacao
Thecc1EG034310 10.0kb downstream 10.0kb downstream 11701 true scaffold_8: 2390315-2402015 Theobroma cacao
Thecc1EG034310 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2390315-2400314 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123822493 5264 Brassicales-Malvales Singleton cluster - no MSA
124348666 5266 SBM View MSA
124250091 5268 Malvidae View MSA
124070276 5270 Rosid View MSA
123742733 5271 Pentapetalae View MSA
122796086 5272 Eudicot View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain