Gene : Thecc1EG034468 T. cacao v1.1
Defline:  (1 of 2) PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Genomic Order:  648
Name:  ? Thecc1EG034468 Secondary Identifier:  ? PAC:27459108
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034468 0.5kb upstream 0.5kb upstream 2975 true scaffold_8: 3105636-3108610 Theobroma cacao
Thecc1EG034468 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3105636-3106135 Theobroma cacao
Thecc1EG034468 0.5kb downstream 0.5kb downstream 2975 true scaffold_8: 3106136-3109110 Theobroma cacao
Thecc1EG034468 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3108611-3109110 Theobroma cacao
Thecc1EG034468 1.0kb upstream 1.0kb upstream 3475 true scaffold_8: 3105136-3108610 Theobroma cacao
Thecc1EG034468 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3105136-3106135 Theobroma cacao
Thecc1EG034468 1.0kb downstream 1.0kb downstream 3475 true scaffold_8: 3106136-3109610 Theobroma cacao
Thecc1EG034468 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3108611-3109610 Theobroma cacao
Thecc1EG034468 2.0kb upstream 2.0kb upstream 4475 true scaffold_8: 3104136-3108610 Theobroma cacao
Thecc1EG034468 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3104136-3106135 Theobroma cacao
Thecc1EG034468 2.0kb downstream 2.0kb downstream 4475 true scaffold_8: 3106136-3110610 Theobroma cacao
Thecc1EG034468 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3108611-3110610 Theobroma cacao
Thecc1EG034468 5.0kb upstream 5.0kb upstream 7475 true scaffold_8: 3101136-3108610 Theobroma cacao
Thecc1EG034468 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3101136-3106135 Theobroma cacao
Thecc1EG034468 5.0kb downstream 5.0kb downstream 7475 true scaffold_8: 3106136-3113610 Theobroma cacao
Thecc1EG034468 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3108611-3113610 Theobroma cacao
Thecc1EG034468 10.0kb upstream 10.0kb upstream 12475 true scaffold_8: 3096136-3108610 Theobroma cacao
Thecc1EG034468 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3096136-3106135 Theobroma cacao
Thecc1EG034468 10.0kb downstream 10.0kb downstream 12475 true scaffold_8: 3106136-3118610 Theobroma cacao
Thecc1EG034468 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3108611-3118610 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834436 5264 Brassicales-Malvales View MSA
124344239 5266 SBM View MSA
124252953 5268 Malvidae View MSA
124073004 5270 Rosid View MSA
123738437 5271 Pentapetalae View MSA
122790242 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain