Gene : Thecc1EG034574 T. cacao v1.1
Defline:  (1 of 103) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  740
Name:  ? Thecc1EG034574 Secondary Identifier:  ? PAC:27459510
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034574 0.5kb upstream 0.5kb upstream 2245 true scaffold_8: 3731618-3733862 Theobroma cacao
Thecc1EG034574 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3731618-3732117 Theobroma cacao
Thecc1EG034574 0.5kb downstream 0.5kb downstream 2245 true scaffold_8: 3732118-3734362 Theobroma cacao
Thecc1EG034574 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3733863-3734362 Theobroma cacao
Thecc1EG034574 1.0kb upstream 1.0kb upstream 2745 true scaffold_8: 3731118-3733862 Theobroma cacao
Thecc1EG034574 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3731118-3732117 Theobroma cacao
Thecc1EG034574 1.0kb downstream 1.0kb downstream 2745 true scaffold_8: 3732118-3734862 Theobroma cacao
Thecc1EG034574 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3733863-3734862 Theobroma cacao
Thecc1EG034574 2.0kb upstream 2.0kb upstream 3745 true scaffold_8: 3730118-3733862 Theobroma cacao
Thecc1EG034574 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3730118-3732117 Theobroma cacao
Thecc1EG034574 2.0kb downstream 2.0kb downstream 3745 true scaffold_8: 3732118-3735862 Theobroma cacao
Thecc1EG034574 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3733863-3735862 Theobroma cacao
Thecc1EG034574 5.0kb upstream 5.0kb upstream 6745 true scaffold_8: 3727118-3733862 Theobroma cacao
Thecc1EG034574 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3727118-3732117 Theobroma cacao
Thecc1EG034574 5.0kb downstream 5.0kb downstream 6745 true scaffold_8: 3732118-3738862 Theobroma cacao
Thecc1EG034574 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3733863-3738862 Theobroma cacao
Thecc1EG034574 10.0kb upstream 10.0kb upstream 11745 true scaffold_8: 3722118-3733862 Theobroma cacao
Thecc1EG034574 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3722118-3732117 Theobroma cacao
Thecc1EG034574 10.0kb downstream 10.0kb downstream 11745 true scaffold_8: 3732118-3743862 Theobroma cacao
Thecc1EG034574 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3733863-3743862 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824459 5264 Brassicales-Malvales View MSA
124348379 5266 SBM View MSA
124253224 5268 Malvidae View MSA
124070728 5270 Rosid View MSA
123747636 5271 Pentapetalae View MSA
122790182 5272 Eudicot View MSA
122048874 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain