Gene : Thecc1EG034534 T. cacao v1.1
Defline:  (1 of 1) K14765 - U3 small nucleolar ribonucleoprotein protein LCP5 (NGDN, LCP5) Genomic Order:  705
Name:  ? Thecc1EG034534 Secondary Identifier:  ? PAC:27457990
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034534 0.5kb upstream 0.5kb upstream 3158 true scaffold_8: 3515614-3518771 Theobroma cacao
Thecc1EG034534 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3515614-3516113 Theobroma cacao
Thecc1EG034534 0.5kb downstream 0.5kb downstream 3158 true scaffold_8: 3516114-3519271 Theobroma cacao
Thecc1EG034534 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3518772-3519271 Theobroma cacao
Thecc1EG034534 1.0kb upstream 1.0kb upstream 3658 true scaffold_8: 3515114-3518771 Theobroma cacao
Thecc1EG034534 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3515114-3516113 Theobroma cacao
Thecc1EG034534 1.0kb downstream 1.0kb downstream 3658 true scaffold_8: 3516114-3519771 Theobroma cacao
Thecc1EG034534 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3518772-3519771 Theobroma cacao
Thecc1EG034534 2.0kb upstream 2.0kb upstream 4658 true scaffold_8: 3514114-3518771 Theobroma cacao
Thecc1EG034534 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3514114-3516113 Theobroma cacao
Thecc1EG034534 2.0kb downstream 2.0kb downstream 4658 true scaffold_8: 3516114-3520771 Theobroma cacao
Thecc1EG034534 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3518772-3520771 Theobroma cacao
Thecc1EG034534 5.0kb upstream 5.0kb upstream 7658 true scaffold_8: 3511114-3518771 Theobroma cacao
Thecc1EG034534 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3511114-3516113 Theobroma cacao
Thecc1EG034534 5.0kb downstream 5.0kb downstream 7658 true scaffold_8: 3516114-3523771 Theobroma cacao
Thecc1EG034534 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3518772-3523771 Theobroma cacao
Thecc1EG034534 10.0kb upstream 10.0kb upstream 12658 true scaffold_8: 3506114-3518771 Theobroma cacao
Thecc1EG034534 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3506114-3516113 Theobroma cacao
Thecc1EG034534 10.0kb downstream 10.0kb downstream 12658 true scaffold_8: 3516114-3528771 Theobroma cacao
Thecc1EG034534 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3518772-3528771 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827972 5264 Brassicales-Malvales View MSA
124344491 5266 SBM View MSA
124242828 5268 Malvidae View MSA
124066836 5270 Rosid View MSA
123740201 5271 Pentapetalae View MSA
122793793 5272 Eudicot View MSA
122047581 5273 Angiosperm View MSA
121345702 5274 Embryophyte View MSA
123380258 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain