Gene : Thecc1EG034512 T. cacao v1.1
Defline:  (1 of 1) 4.3.2.1 - Argininosuccinate lyase / Omega-N-(L-arginino)succinate arginine-lyase Genomic Order:  684
Name:  ? Thecc1EG034512 Secondary Identifier:  ? PAC:27458543
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ARGSYNBSUB-PWY Theobroma cacao pathologic  
Tcacao ARGSYN-PWY Theobroma cacao pathologic  
Tcacao PWY-4984 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034512 0.5kb upstream 0.5kb upstream 4299 true scaffold_8: 3367392-3371690 Theobroma cacao
Thecc1EG034512 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3371191-3371690 Theobroma cacao
Thecc1EG034512 0.5kb downstream 0.5kb downstream 4299 true scaffold_8: 3366892-3371190 Theobroma cacao
Thecc1EG034512 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3366892-3367391 Theobroma cacao
Thecc1EG034512 1.0kb upstream 1.0kb upstream 4799 true scaffold_8: 3367392-3372190 Theobroma cacao
Thecc1EG034512 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3371191-3372190 Theobroma cacao
Thecc1EG034512 1.0kb downstream 1.0kb downstream 4799 true scaffold_8: 3366392-3371190 Theobroma cacao
Thecc1EG034512 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3366392-3367391 Theobroma cacao
Thecc1EG034512 2.0kb upstream 2.0kb upstream 5799 true scaffold_8: 3367392-3373190 Theobroma cacao
Thecc1EG034512 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3371191-3373190 Theobroma cacao
Thecc1EG034512 2.0kb downstream 2.0kb downstream 5799 true scaffold_8: 3365392-3371190 Theobroma cacao
Thecc1EG034512 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3365392-3367391 Theobroma cacao
Thecc1EG034512 5.0kb upstream 5.0kb upstream 8799 true scaffold_8: 3367392-3376190 Theobroma cacao
Thecc1EG034512 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3371191-3376190 Theobroma cacao
Thecc1EG034512 5.0kb downstream 5.0kb downstream 8799 true scaffold_8: 3362392-3371190 Theobroma cacao
Thecc1EG034512 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3362392-3367391 Theobroma cacao
Thecc1EG034512 10.0kb upstream 10.0kb upstream 13799 true scaffold_8: 3367392-3381190 Theobroma cacao
Thecc1EG034512 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3371191-3381190 Theobroma cacao
Thecc1EG034512 10.0kb downstream 10.0kb downstream 13799 true scaffold_8: 3357392-3371190 Theobroma cacao
Thecc1EG034512 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3357392-3367391 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830646 5264 Brassicales-Malvales View MSA
124339181 5266 SBM View MSA
124238299 5268 Malvidae View MSA
124060932 5270 Rosid View MSA
123748578 5271 Pentapetalae View MSA
122786563 5272 Eudicot View MSA
122042713 5273 Angiosperm View MSA
121348012 5274 Embryophyte View MSA
123425027 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain