Gene : Thecc1EG034625 T. cacao v1.1
Defline:  (1 of 6) 3.2.1.8 - Endo-1,4-beta-xylanase Genomic Order:  784
Name:  ? Thecc1EG034625 Secondary Identifier:  ? PAC:27457811
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034625 0.5kb upstream 0.5kb upstream 6536 true scaffold_8: 3974286-3980821 Theobroma cacao
Thecc1EG034625 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3974286-3974785 Theobroma cacao
Thecc1EG034625 0.5kb downstream 0.5kb downstream 6536 true scaffold_8: 3974786-3981321 Theobroma cacao
Thecc1EG034625 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3980822-3981321 Theobroma cacao
Thecc1EG034625 1.0kb upstream 1.0kb upstream 7036 true scaffold_8: 3973786-3980821 Theobroma cacao
Thecc1EG034625 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3973786-3974785 Theobroma cacao
Thecc1EG034625 1.0kb downstream 1.0kb downstream 7036 true scaffold_8: 3974786-3981821 Theobroma cacao
Thecc1EG034625 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3980822-3981821 Theobroma cacao
Thecc1EG034625 2.0kb upstream 2.0kb upstream 8036 true scaffold_8: 3972786-3980821 Theobroma cacao
Thecc1EG034625 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3972786-3974785 Theobroma cacao
Thecc1EG034625 2.0kb downstream 2.0kb downstream 8036 true scaffold_8: 3974786-3982821 Theobroma cacao
Thecc1EG034625 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3980822-3982821 Theobroma cacao
Thecc1EG034625 5.0kb upstream 5.0kb upstream 11036 true scaffold_8: 3969786-3980821 Theobroma cacao
Thecc1EG034625 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3969786-3974785 Theobroma cacao
Thecc1EG034625 5.0kb downstream 5.0kb downstream 11036 true scaffold_8: 3974786-3985821 Theobroma cacao
Thecc1EG034625 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3980822-3985821 Theobroma cacao
Thecc1EG034625 10.0kb upstream 10.0kb upstream 16036 true scaffold_8: 3964786-3980821 Theobroma cacao
Thecc1EG034625 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3964786-3974785 Theobroma cacao
Thecc1EG034625 10.0kb downstream 10.0kb downstream 16036 true scaffold_8: 3974786-3990821 Theobroma cacao
Thecc1EG034625 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3980822-3990821 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837651 5264 Brassicales-Malvales View MSA
124339287 5266 SBM View MSA
124253078 5268 Malvidae View MSA
124066828 5270 Rosid View MSA
123742236 5271 Pentapetalae View MSA
122786340 5272 Eudicot View MSA
122047511 5273 Angiosperm View MSA
121347321 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain