Gene : Thecc1EG034610 T. cacao v1.1

Defline:  (1 of 2) PTHR22950//PTHR22950:SF278 - AMINO ACID TRANSPORTER // AMINO ACID PERMEASE 1-RELATED Genomic Order:  771
Name:  ? Thecc1EG034610 Secondary Identifier:  ? PAC:27458105

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034610 0.5kb upstream 0.5kb upstream 4393 true scaffold_8: 3913526-3917918 Theobroma cacao
Thecc1EG034610 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3913526-3914025 Theobroma cacao
Thecc1EG034610 0.5kb downstream 0.5kb downstream 4393 true scaffold_8: 3914026-3918418 Theobroma cacao
Thecc1EG034610 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3917919-3918418 Theobroma cacao
Thecc1EG034610 1.0kb upstream 1.0kb upstream 4893 true scaffold_8: 3913026-3917918 Theobroma cacao
Thecc1EG034610 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3913026-3914025 Theobroma cacao
Thecc1EG034610 1.0kb downstream 1.0kb downstream 4893 true scaffold_8: 3914026-3918918 Theobroma cacao
Thecc1EG034610 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3917919-3918918 Theobroma cacao
Thecc1EG034610 2.0kb upstream 2.0kb upstream 5893 true scaffold_8: 3912026-3917918 Theobroma cacao
Thecc1EG034610 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3912026-3914025 Theobroma cacao
Thecc1EG034610 2.0kb downstream 2.0kb downstream 5893 true scaffold_8: 3914026-3919918 Theobroma cacao
Thecc1EG034610 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3917919-3919918 Theobroma cacao
Thecc1EG034610 5.0kb upstream 5.0kb upstream 8893 true scaffold_8: 3909026-3917918 Theobroma cacao
Thecc1EG034610 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3909026-3914025 Theobroma cacao
Thecc1EG034610 5.0kb downstream 5.0kb downstream 8893 true scaffold_8: 3914026-3922918 Theobroma cacao
Thecc1EG034610 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3917919-3922918 Theobroma cacao
Thecc1EG034610 10.0kb upstream 10.0kb upstream 13893 true scaffold_8: 3904026-3917918 Theobroma cacao
Thecc1EG034610 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3904026-3914025 Theobroma cacao
Thecc1EG034610 10.0kb downstream 10.0kb downstream 13893 true scaffold_8: 3914026-3927918 Theobroma cacao
Thecc1EG034610 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3917919-3927918 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838794 5264 Brassicales-Malvales View MSA
124336931 5266 SBM View MSA
124238078 5268 Malvidae View MSA
124060792 5270 Rosid View MSA
123749377 5271 Pentapetalae View MSA
122789981 5272 Eudicot View MSA
122044939 5273 Angiosperm View MSA
121310365 5274 Embryophyte View MSA
123347867 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain