Gene : Thecc1EG034978 T. cacao v1.1
Defline:  (1 of 2) PF13881 - Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD_2) Genomic Order:  1096
Name:  ? Thecc1EG034978 Secondary Identifier:  ? PAC:27458792
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034978 0.5kb upstream 0.5kb upstream 2929 true scaffold_8: 5804189-5807117 Theobroma cacao
Thecc1EG034978 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 5804189-5804688 Theobroma cacao
Thecc1EG034978 0.5kb downstream 0.5kb downstream 2929 true scaffold_8: 5804689-5807617 Theobroma cacao
Thecc1EG034978 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 5807118-5807617 Theobroma cacao
Thecc1EG034978 1.0kb upstream 1.0kb upstream 3429 true scaffold_8: 5803689-5807117 Theobroma cacao
Thecc1EG034978 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 5803689-5804688 Theobroma cacao
Thecc1EG034978 1.0kb downstream 1.0kb downstream 3429 true scaffold_8: 5804689-5808117 Theobroma cacao
Thecc1EG034978 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 5807118-5808117 Theobroma cacao
Thecc1EG034978 2.0kb upstream 2.0kb upstream 4429 true scaffold_8: 5802689-5807117 Theobroma cacao
Thecc1EG034978 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 5802689-5804688 Theobroma cacao
Thecc1EG034978 2.0kb downstream 2.0kb downstream 4429 true scaffold_8: 5804689-5809117 Theobroma cacao
Thecc1EG034978 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 5807118-5809117 Theobroma cacao
Thecc1EG034978 5.0kb upstream 5.0kb upstream 7429 true scaffold_8: 5799689-5807117 Theobroma cacao
Thecc1EG034978 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 5799689-5804688 Theobroma cacao
Thecc1EG034978 5.0kb downstream 5.0kb downstream 7429 true scaffold_8: 5804689-5812117 Theobroma cacao
Thecc1EG034978 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 5807118-5812117 Theobroma cacao
Thecc1EG034978 10.0kb upstream 10.0kb upstream 12429 true scaffold_8: 5794689-5807117 Theobroma cacao
Thecc1EG034978 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 5794689-5804688 Theobroma cacao
Thecc1EG034978 10.0kb downstream 10.0kb downstream 12429 true scaffold_8: 5804689-5817117 Theobroma cacao
Thecc1EG034978 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 5807118-5817117 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835560 5264 Brassicales-Malvales View MSA
124340130 5266 SBM View MSA
124244751 5268 Malvidae View MSA
124069893 5270 Rosid View MSA
123744059 5271 Pentapetalae View MSA
122795764 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain