Gene : Thecc1EG035143 T. cacao v1.1
Defline:  (1 of 1) PTHR26402//PTHR26402:SF498 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // SUBFAMILY NOT NAMED Genomic Order:  1235
Name:  ? Thecc1EG035143 Secondary Identifier:  ? PAC:27457792
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035143 0.5kb upstream 0.5kb upstream 3953 true scaffold_8: 6717160-6721112 Theobroma cacao
Thecc1EG035143 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6717160-6717659 Theobroma cacao
Thecc1EG035143 0.5kb downstream 0.5kb downstream 3953 true scaffold_8: 6717660-6721612 Theobroma cacao
Thecc1EG035143 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6721113-6721612 Theobroma cacao
Thecc1EG035143 1.0kb upstream 1.0kb upstream 4453 true scaffold_8: 6716660-6721112 Theobroma cacao
Thecc1EG035143 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6716660-6717659 Theobroma cacao
Thecc1EG035143 1.0kb downstream 1.0kb downstream 4453 true scaffold_8: 6717660-6722112 Theobroma cacao
Thecc1EG035143 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6721113-6722112 Theobroma cacao
Thecc1EG035143 2.0kb upstream 2.0kb upstream 5453 true scaffold_8: 6715660-6721112 Theobroma cacao
Thecc1EG035143 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6715660-6717659 Theobroma cacao
Thecc1EG035143 2.0kb downstream 2.0kb downstream 5453 true scaffold_8: 6717660-6723112 Theobroma cacao
Thecc1EG035143 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6721113-6723112 Theobroma cacao
Thecc1EG035143 5.0kb upstream 5.0kb upstream 8453 true scaffold_8: 6712660-6721112 Theobroma cacao
Thecc1EG035143 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6712660-6717659 Theobroma cacao
Thecc1EG035143 5.0kb downstream 5.0kb downstream 8453 true scaffold_8: 6717660-6726112 Theobroma cacao
Thecc1EG035143 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6721113-6726112 Theobroma cacao
Thecc1EG035143 10.0kb upstream 10.0kb upstream 13453 true scaffold_8: 6707660-6721112 Theobroma cacao
Thecc1EG035143 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6707660-6717659 Theobroma cacao
Thecc1EG035143 10.0kb downstream 10.0kb downstream 13453 true scaffold_8: 6717660-6731112 Theobroma cacao
Thecc1EG035143 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6721113-6731112 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791997 5273 Angiosperm View MSA
123824124 5264 Brassicales-Malvales View MSA
124349601 5266 SBM View MSA
124246511 5268 Malvidae View MSA
124070337 5270 Rosid View MSA
123744079 5271 Pentapetalae View MSA
122795833 5272 Eudicot View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain