Gene : Thecc1EG035107 T. cacao v1.1
Defline:  (1 of 4) PF03108//PF04434//PF10551 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  1204
Name:  ? Thecc1EG035107 Secondary Identifier:  ? PAC:27459422
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035107 0.5kb upstream 0.5kb upstream 5576 true scaffold_8: 6512013-6517588 Theobroma cacao
Thecc1EG035107 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6517089-6517588 Theobroma cacao
Thecc1EG035107 0.5kb downstream 0.5kb downstream 5576 true scaffold_8: 6511513-6517088 Theobroma cacao
Thecc1EG035107 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6511513-6512012 Theobroma cacao
Thecc1EG035107 1.0kb upstream 1.0kb upstream 6076 true scaffold_8: 6512013-6518088 Theobroma cacao
Thecc1EG035107 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6517089-6518088 Theobroma cacao
Thecc1EG035107 1.0kb downstream 1.0kb downstream 6076 true scaffold_8: 6511013-6517088 Theobroma cacao
Thecc1EG035107 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6511013-6512012 Theobroma cacao
Thecc1EG035107 2.0kb upstream 2.0kb upstream 7076 true scaffold_8: 6512013-6519088 Theobroma cacao
Thecc1EG035107 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6517089-6519088 Theobroma cacao
Thecc1EG035107 2.0kb downstream 2.0kb downstream 7076 true scaffold_8: 6510013-6517088 Theobroma cacao
Thecc1EG035107 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6510013-6512012 Theobroma cacao
Thecc1EG035107 5.0kb upstream 5.0kb upstream 10076 true scaffold_8: 6512013-6522088 Theobroma cacao
Thecc1EG035107 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6517089-6522088 Theobroma cacao
Thecc1EG035107 5.0kb downstream 5.0kb downstream 10076 true scaffold_8: 6507013-6517088 Theobroma cacao
Thecc1EG035107 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6507013-6512012 Theobroma cacao
Thecc1EG035107 10.0kb upstream 10.0kb upstream 15076 true scaffold_8: 6512013-6527088 Theobroma cacao
Thecc1EG035107 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6517089-6527088 Theobroma cacao
Thecc1EG035107 10.0kb downstream 10.0kb downstream 15076 true scaffold_8: 6502013-6517088 Theobroma cacao
Thecc1EG035107 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6502013-6512012 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834670 5264 Brassicales-Malvales View MSA
124341669 5266 SBM View MSA
124243275 5268 Malvidae View MSA
124060728 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain