Gene : Thecc1EG035648 T. cacao v1.1
Defline:  (1 of 1) PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Genomic Order:  1531
Name:  ? Thecc1EG035648 Secondary Identifier:  ? PAC:27458093
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035648 0.5kb upstream 0.5kb upstream 26138 true scaffold_8: 10931301-10957438 Theobroma cacao
Thecc1EG035648 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 10931301-10931800 Theobroma cacao
Thecc1EG035648 0.5kb downstream 0.5kb downstream 26138 true scaffold_8: 10931801-10957938 Theobroma cacao
Thecc1EG035648 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 10957439-10957938 Theobroma cacao
Thecc1EG035648 1.0kb upstream 1.0kb upstream 26638 true scaffold_8: 10930801-10957438 Theobroma cacao
Thecc1EG035648 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 10930801-10931800 Theobroma cacao
Thecc1EG035648 1.0kb downstream 1.0kb downstream 26638 true scaffold_8: 10931801-10958438 Theobroma cacao
Thecc1EG035648 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 10957439-10958438 Theobroma cacao
Thecc1EG035648 2.0kb upstream 2.0kb upstream 27638 true scaffold_8: 10929801-10957438 Theobroma cacao
Thecc1EG035648 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 10929801-10931800 Theobroma cacao
Thecc1EG035648 2.0kb downstream 2.0kb downstream 27638 true scaffold_8: 10931801-10959438 Theobroma cacao
Thecc1EG035648 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 10957439-10959438 Theobroma cacao
Thecc1EG035648 5.0kb upstream 5.0kb upstream 30638 true scaffold_8: 10926801-10957438 Theobroma cacao
Thecc1EG035648 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 10926801-10931800 Theobroma cacao
Thecc1EG035648 5.0kb downstream 5.0kb downstream 30638 true scaffold_8: 10931801-10962438 Theobroma cacao
Thecc1EG035648 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 10957439-10962438 Theobroma cacao
Thecc1EG035648 10.0kb upstream 10.0kb upstream 35638 true scaffold_8: 10921801-10957438 Theobroma cacao
Thecc1EG035648 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 10921801-10931800 Theobroma cacao
Thecc1EG035648 10.0kb downstream 10.0kb downstream 35638 true scaffold_8: 10931801-10967438 Theobroma cacao
Thecc1EG035648 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 10957439-10967438 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123822254 5264 Brassicales-Malvales Singleton cluster - no MSA
124318397 5266 SBM Singleton cluster - no MSA
124167052 5268 Malvidae Singleton cluster - no MSA
123890590 5270 Rosid Singleton cluster - no MSA
123472916 5271 Pentapetalae Singleton cluster - no MSA
122508201 5272 Eudicot Singleton cluster - no MSA
122046546 5273 Angiosperm View MSA
121348695 5274 Embryophyte View MSA
123380977 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain