Gene : Thecc1EG036034 T. cacao v1.1

Defline:  (1 of 1) PTHR31989//PTHR31989:SF18 - FAMILY NOT NAMED // PROTEIN BEARSKIN1 Genomic Order:  1660
Name:  ? Thecc1EG036034 Secondary Identifier:  ? PAC:27458080

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036034 0.5kb upstream 0.5kb upstream 17325 true scaffold_8: 15400133-15417457 Theobroma cacao
Thecc1EG036034 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 15416958-15417457 Theobroma cacao
Thecc1EG036034 0.5kb downstream 0.5kb downstream 17325 true scaffold_8: 15399633-15416957 Theobroma cacao
Thecc1EG036034 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 15399633-15400132 Theobroma cacao
Thecc1EG036034 1.0kb upstream 1.0kb upstream 17825 true scaffold_8: 15400133-15417957 Theobroma cacao
Thecc1EG036034 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 15416958-15417957 Theobroma cacao
Thecc1EG036034 1.0kb downstream 1.0kb downstream 17825 true scaffold_8: 15399133-15416957 Theobroma cacao
Thecc1EG036034 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 15399133-15400132 Theobroma cacao
Thecc1EG036034 2.0kb upstream 2.0kb upstream 18825 true scaffold_8: 15400133-15418957 Theobroma cacao
Thecc1EG036034 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 15416958-15418957 Theobroma cacao
Thecc1EG036034 2.0kb downstream 2.0kb downstream 18825 true scaffold_8: 15398133-15416957 Theobroma cacao
Thecc1EG036034 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 15398133-15400132 Theobroma cacao
Thecc1EG036034 5.0kb upstream 5.0kb upstream 21825 true scaffold_8: 15400133-15421957 Theobroma cacao
Thecc1EG036034 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 15416958-15421957 Theobroma cacao
Thecc1EG036034 5.0kb downstream 5.0kb downstream 21825 true scaffold_8: 15395133-15416957 Theobroma cacao
Thecc1EG036034 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 15395133-15400132 Theobroma cacao
Thecc1EG036034 10.0kb upstream 10.0kb upstream 26825 true scaffold_8: 15400133-15426957 Theobroma cacao
Thecc1EG036034 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 15416958-15426957 Theobroma cacao
Thecc1EG036034 10.0kb downstream 10.0kb downstream 26825 true scaffold_8: 15390133-15416957 Theobroma cacao
Thecc1EG036034 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 15390133-15400132 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829824 5264 Brassicales-Malvales View MSA
124346482 5266 SBM View MSA
124251477 5268 Malvidae View MSA
124062981 5270 Rosid View MSA
123744890 5271 Pentapetalae View MSA
122787580 5272 Eudicot View MSA
122046841 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain