Gene : Thecc1EG036011 T. cacao v1.1
Defline:  (1 of 1) PTHR22835//PTHR22835:SF168 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1648
Name:  ? Thecc1EG036011 Secondary Identifier:  ? PAC:27457585
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPAS-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036011 0.5kb upstream 0.5kb upstream 2903 true scaffold_8: 15210818-15213720 Theobroma cacao
Thecc1EG036011 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 15213221-15213720 Theobroma cacao
Thecc1EG036011 0.5kb downstream 0.5kb downstream 2903 true scaffold_8: 15210318-15213220 Theobroma cacao
Thecc1EG036011 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 15210318-15210817 Theobroma cacao
Thecc1EG036011 1.0kb upstream 1.0kb upstream 3403 true scaffold_8: 15210818-15214220 Theobroma cacao
Thecc1EG036011 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 15213221-15214220 Theobroma cacao
Thecc1EG036011 1.0kb downstream 1.0kb downstream 3403 true scaffold_8: 15209818-15213220 Theobroma cacao
Thecc1EG036011 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 15209818-15210817 Theobroma cacao
Thecc1EG036011 2.0kb upstream 2.0kb upstream 4403 true scaffold_8: 15210818-15215220 Theobroma cacao
Thecc1EG036011 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 15213221-15215220 Theobroma cacao
Thecc1EG036011 2.0kb downstream 2.0kb downstream 4403 true scaffold_8: 15208818-15213220 Theobroma cacao
Thecc1EG036011 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 15208818-15210817 Theobroma cacao
Thecc1EG036011 5.0kb upstream 5.0kb upstream 7403 true scaffold_8: 15210818-15218220 Theobroma cacao
Thecc1EG036011 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 15213221-15218220 Theobroma cacao
Thecc1EG036011 5.0kb downstream 5.0kb downstream 7403 true scaffold_8: 15205818-15213220 Theobroma cacao
Thecc1EG036011 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 15205818-15210817 Theobroma cacao
Thecc1EG036011 10.0kb upstream 10.0kb upstream 12403 true scaffold_8: 15210818-15223220 Theobroma cacao
Thecc1EG036011 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 15213221-15223220 Theobroma cacao
Thecc1EG036011 10.0kb downstream 10.0kb downstream 12403 true scaffold_8: 15200818-15213220 Theobroma cacao
Thecc1EG036011 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 15200818-15210817 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834355 5264 Brassicales-Malvales View MSA
124343161 5266 SBM View MSA
124243693 5268 Malvidae View MSA
124069396 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain