Gene : Thecc1EG036751 T. cacao v1.1
Defline:  (1 of 3) 6.1.1.12 - Aspartate--tRNA ligase / Aspartyl-tRNA synthetase Genomic Order:  8
Name:  ? Thecc1EG036751 Secondary Identifier:  ? PAC:27427099
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao TRNA-CHARGING-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036751 0.5kb upstream 0.5kb upstream 11081 true scaffold_9: 83998-95078 Theobroma cacao
Thecc1EG036751 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 94579-95078 Theobroma cacao
Thecc1EG036751 0.5kb downstream 0.5kb downstream 11081 true scaffold_9: 83498-94578 Theobroma cacao
Thecc1EG036751 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 83498-83997 Theobroma cacao
Thecc1EG036751 1.0kb upstream 1.0kb upstream 11581 true scaffold_9: 83998-95578 Theobroma cacao
Thecc1EG036751 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 94579-95578 Theobroma cacao
Thecc1EG036751 1.0kb downstream 1.0kb downstream 11581 true scaffold_9: 82998-94578 Theobroma cacao
Thecc1EG036751 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 82998-83997 Theobroma cacao
Thecc1EG036751 2.0kb upstream 2.0kb upstream 12581 true scaffold_9: 83998-96578 Theobroma cacao
Thecc1EG036751 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 94579-96578 Theobroma cacao
Thecc1EG036751 2.0kb downstream 2.0kb downstream 12581 true scaffold_9: 81998-94578 Theobroma cacao
Thecc1EG036751 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 81998-83997 Theobroma cacao
Thecc1EG036751 5.0kb upstream 5.0kb upstream 15581 true scaffold_9: 83998-99578 Theobroma cacao
Thecc1EG036751 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 94579-99578 Theobroma cacao
Thecc1EG036751 5.0kb downstream 5.0kb downstream 15581 true scaffold_9: 78998-94578 Theobroma cacao
Thecc1EG036751 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 78998-83997 Theobroma cacao
Thecc1EG036751 10.0kb upstream 10.0kb upstream 20581 true scaffold_9: 83998-104578 Theobroma cacao
Thecc1EG036751 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 94579-104578 Theobroma cacao
Thecc1EG036751 10.0kb downstream 10.0kb downstream 20581 true scaffold_9: 73998-94578 Theobroma cacao
Thecc1EG036751 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 73998-83997 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830124 5264 Brassicales-Malvales View MSA
124340774 5266 SBM View MSA
124240572 5268 Malvidae View MSA
124066804 5270 Rosid View MSA
123746132 5271 Pentapetalae View MSA
122792438 5272 Eudicot View MSA
122047949 5273 Angiosperm View MSA
121349506 5274 Embryophyte View MSA
123428007 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain