Gene : Thecc1EG036636 T. cacao v1.1
Defline:  (1 of 1) PTHR33109:SF6 - EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 7-RELATED Genomic Order:  1995
Name:  ? Thecc1EG036636 Secondary Identifier:  ? PAC:27458375
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036636 0.5kb upstream 0.5kb upstream 1906 true scaffold_8: 20647707-20649612 Theobroma cacao
Thecc1EG036636 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 20647707-20648206 Theobroma cacao
Thecc1EG036636 0.5kb downstream 0.5kb downstream 1906 true scaffold_8: 20648207-20650112 Theobroma cacao
Thecc1EG036636 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 20649613-20650112 Theobroma cacao
Thecc1EG036636 1.0kb upstream 1.0kb upstream 2406 true scaffold_8: 20647207-20649612 Theobroma cacao
Thecc1EG036636 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 20647207-20648206 Theobroma cacao
Thecc1EG036636 1.0kb downstream 1.0kb downstream 2406 true scaffold_8: 20648207-20650612 Theobroma cacao
Thecc1EG036636 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 20649613-20650612 Theobroma cacao
Thecc1EG036636 2.0kb upstream 2.0kb upstream 3406 true scaffold_8: 20646207-20649612 Theobroma cacao
Thecc1EG036636 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 20646207-20648206 Theobroma cacao
Thecc1EG036636 2.0kb downstream 2.0kb downstream 3406 true scaffold_8: 20648207-20651612 Theobroma cacao
Thecc1EG036636 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 20649613-20651612 Theobroma cacao
Thecc1EG036636 5.0kb upstream 5.0kb upstream 6406 true scaffold_8: 20643207-20649612 Theobroma cacao
Thecc1EG036636 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 20643207-20648206 Theobroma cacao
Thecc1EG036636 5.0kb downstream 5.0kb downstream 6406 true scaffold_8: 20648207-20654612 Theobroma cacao
Thecc1EG036636 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 20649613-20654612 Theobroma cacao
Thecc1EG036636 10.0kb upstream 10.0kb upstream 11406 true scaffold_8: 20638207-20649612 Theobroma cacao
Thecc1EG036636 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 20638207-20648206 Theobroma cacao
Thecc1EG036636 10.0kb downstream 10.0kb downstream 11406 true scaffold_8: 20648207-20659612 Theobroma cacao
Thecc1EG036636 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 20649613-20659612 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828769 5264 Brassicales-Malvales View MSA
124339050 5266 SBM View MSA
124251653 5268 Malvidae View MSA
124066139 5270 Rosid View MSA
123748045 5271 Pentapetalae View MSA
122792387 5272 Eudicot View MSA
122049179 5273 Angiosperm View MSA
121350118 5274 Embryophyte View MSA
123381585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain