Gene : Thecc1EG036867 T. cacao v1.1

Defline:  (1 of 1) PTHR12136//PTHR12136:SF38 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // SUBFAMILY NOT NAMED Genomic Order:  115
Name:  ? Thecc1EG036867 Secondary Identifier:  ? PAC:27426884

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036867 0.5kb upstream 0.5kb upstream 1753 true scaffold_9: 620208-621960 Theobroma cacao
Thecc1EG036867 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 620208-620707 Theobroma cacao
Thecc1EG036867 0.5kb downstream 0.5kb downstream 1753 true scaffold_9: 620708-622460 Theobroma cacao
Thecc1EG036867 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 621961-622460 Theobroma cacao
Thecc1EG036867 1.0kb upstream 1.0kb upstream 2253 true scaffold_9: 619708-621960 Theobroma cacao
Thecc1EG036867 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 619708-620707 Theobroma cacao
Thecc1EG036867 1.0kb downstream 1.0kb downstream 2253 true scaffold_9: 620708-622960 Theobroma cacao
Thecc1EG036867 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 621961-622960 Theobroma cacao
Thecc1EG036867 2.0kb upstream 2.0kb upstream 3253 true scaffold_9: 618708-621960 Theobroma cacao
Thecc1EG036867 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 618708-620707 Theobroma cacao
Thecc1EG036867 2.0kb downstream 2.0kb downstream 3253 true scaffold_9: 620708-623960 Theobroma cacao
Thecc1EG036867 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 621961-623960 Theobroma cacao
Thecc1EG036867 5.0kb upstream 5.0kb upstream 6253 true scaffold_9: 615708-621960 Theobroma cacao
Thecc1EG036867 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 615708-620707 Theobroma cacao
Thecc1EG036867 5.0kb downstream 5.0kb downstream 6253 true scaffold_9: 620708-626960 Theobroma cacao
Thecc1EG036867 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 621961-626960 Theobroma cacao
Thecc1EG036867 10.0kb upstream 10.0kb upstream 11253 true scaffold_9: 610708-621960 Theobroma cacao
Thecc1EG036867 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 610708-620707 Theobroma cacao
Thecc1EG036867 10.0kb downstream 10.0kb downstream 11253 true scaffold_9: 620708-631960 Theobroma cacao
Thecc1EG036867 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 621961-631960 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835778 5264 Brassicales-Malvales View MSA
124341115 5266 SBM View MSA
124253578 5268 Malvidae View MSA
124064079 5270 Rosid View MSA
123745127 5271 Pentapetalae View MSA
122790328 5272 Eudicot View MSA
122048003 5273 Angiosperm View MSA
121346001 5274 Embryophyte View MSA
123380307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain