Gene : Thecc1EG037014 T. cacao v1.1
Defline:  (1 of 39) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  253
Name:  ? Thecc1EG037014 Secondary Identifier:  ? PAC:27427117
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037014 0.5kb upstream 0.5kb upstream 5034 true scaffold_9: 1363345-1368378 Theobroma cacao
Thecc1EG037014 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1363345-1363844 Theobroma cacao
Thecc1EG037014 0.5kb downstream 0.5kb downstream 5034 true scaffold_9: 1363845-1368878 Theobroma cacao
Thecc1EG037014 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1368379-1368878 Theobroma cacao
Thecc1EG037014 1.0kb upstream 1.0kb upstream 5534 true scaffold_9: 1362845-1368378 Theobroma cacao
Thecc1EG037014 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1362845-1363844 Theobroma cacao
Thecc1EG037014 1.0kb downstream 1.0kb downstream 5534 true scaffold_9: 1363845-1369378 Theobroma cacao
Thecc1EG037014 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1368379-1369378 Theobroma cacao
Thecc1EG037014 2.0kb upstream 2.0kb upstream 6534 true scaffold_9: 1361845-1368378 Theobroma cacao
Thecc1EG037014 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1361845-1363844 Theobroma cacao
Thecc1EG037014 2.0kb downstream 2.0kb downstream 6534 true scaffold_9: 1363845-1370378 Theobroma cacao
Thecc1EG037014 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1368379-1370378 Theobroma cacao
Thecc1EG037014 5.0kb upstream 5.0kb upstream 9534 true scaffold_9: 1358845-1368378 Theobroma cacao
Thecc1EG037014 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1358845-1363844 Theobroma cacao
Thecc1EG037014 5.0kb downstream 5.0kb downstream 9534 true scaffold_9: 1363845-1373378 Theobroma cacao
Thecc1EG037014 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1368379-1373378 Theobroma cacao
Thecc1EG037014 10.0kb upstream 10.0kb upstream 14534 true scaffold_9: 1353845-1368378 Theobroma cacao
Thecc1EG037014 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1353845-1363844 Theobroma cacao
Thecc1EG037014 10.0kb downstream 10.0kb downstream 14534 true scaffold_9: 1363845-1378378 Theobroma cacao
Thecc1EG037014 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1368379-1378378 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841125 5264 Brassicales-Malvales View MSA
124351120 5266 SBM View MSA
124249641 5268 Malvidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain