Gene : Thecc1EG036961 T. cacao v1.1

Defline:  (1 of 1) KOG0271//KOG0275//KOG0293//KOG0315 - Notchless-like WD40 repeat-containing protein // Conserved WD40 repeat-containing protein // WD40 repeat-containing protein // G-protein beta subunit-like protein (contains WD40 repeats) Genomic Order:  200
Name:  ? Thecc1EG036961 Secondary Identifier:  ? PAC:27430912

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036961 0.5kb upstream 0.5kb upstream 8119 true scaffold_9: 1110475-1118593 Theobroma cacao
Thecc1EG036961 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1118094-1118593 Theobroma cacao
Thecc1EG036961 0.5kb downstream 0.5kb downstream 8119 true scaffold_9: 1109975-1118093 Theobroma cacao
Thecc1EG036961 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1109975-1110474 Theobroma cacao
Thecc1EG036961 1.0kb upstream 1.0kb upstream 8619 true scaffold_9: 1110475-1119093 Theobroma cacao
Thecc1EG036961 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1118094-1119093 Theobroma cacao
Thecc1EG036961 1.0kb downstream 1.0kb downstream 8619 true scaffold_9: 1109475-1118093 Theobroma cacao
Thecc1EG036961 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1109475-1110474 Theobroma cacao
Thecc1EG036961 2.0kb upstream 2.0kb upstream 9619 true scaffold_9: 1110475-1120093 Theobroma cacao
Thecc1EG036961 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1118094-1120093 Theobroma cacao
Thecc1EG036961 2.0kb downstream 2.0kb downstream 9619 true scaffold_9: 1108475-1118093 Theobroma cacao
Thecc1EG036961 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1108475-1110474 Theobroma cacao
Thecc1EG036961 5.0kb upstream 5.0kb upstream 12619 true scaffold_9: 1110475-1123093 Theobroma cacao
Thecc1EG036961 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1118094-1123093 Theobroma cacao
Thecc1EG036961 5.0kb downstream 5.0kb downstream 12619 true scaffold_9: 1105475-1118093 Theobroma cacao
Thecc1EG036961 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1105475-1110474 Theobroma cacao
Thecc1EG036961 10.0kb upstream 10.0kb upstream 17619 true scaffold_9: 1110475-1128093 Theobroma cacao
Thecc1EG036961 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1118094-1128093 Theobroma cacao
Thecc1EG036961 10.0kb downstream 10.0kb downstream 17619 true scaffold_9: 1100475-1118093 Theobroma cacao
Thecc1EG036961 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1100475-1110474 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121784042 5273 Angiosperm View MSA
123825485 5264 Brassicales-Malvales View MSA
124349308 5266 SBM View MSA
124247147 5268 Malvidae View MSA
124052328 5270 Rosid View MSA
123755880 5271 Pentapetalae View MSA
122777090 5272 Eudicot View MSA
121055477 5274 Embryophyte View MSA
123095408 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain