Gene : Thecc1EG037135 T. cacao v1.1
Defline:  (1 of 8) PTHR31236//PTHR31236:SF2 - FAMILY NOT NAMED // DEHYDRATION-RESPONSIVE PROTEIN RD22 Genomic Order:  364
Name:  ? Thecc1EG037135 Secondary Identifier:  ? PAC:27430793
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037135 0.5kb upstream 0.5kb upstream 2469 true scaffold_9: 1940840-1943308 Theobroma cacao
Thecc1EG037135 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1942809-1943308 Theobroma cacao
Thecc1EG037135 0.5kb downstream 0.5kb downstream 2469 true scaffold_9: 1940340-1942808 Theobroma cacao
Thecc1EG037135 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1940340-1940839 Theobroma cacao
Thecc1EG037135 1.0kb upstream 1.0kb upstream 2969 true scaffold_9: 1940840-1943808 Theobroma cacao
Thecc1EG037135 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1942809-1943808 Theobroma cacao
Thecc1EG037135 1.0kb downstream 1.0kb downstream 2969 true scaffold_9: 1939840-1942808 Theobroma cacao
Thecc1EG037135 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1939840-1940839 Theobroma cacao
Thecc1EG037135 2.0kb upstream 2.0kb upstream 3969 true scaffold_9: 1940840-1944808 Theobroma cacao
Thecc1EG037135 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1942809-1944808 Theobroma cacao
Thecc1EG037135 2.0kb downstream 2.0kb downstream 3969 true scaffold_9: 1938840-1942808 Theobroma cacao
Thecc1EG037135 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1938840-1940839 Theobroma cacao
Thecc1EG037135 5.0kb upstream 5.0kb upstream 6969 true scaffold_9: 1940840-1947808 Theobroma cacao
Thecc1EG037135 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1942809-1947808 Theobroma cacao
Thecc1EG037135 5.0kb downstream 5.0kb downstream 6969 true scaffold_9: 1935840-1942808 Theobroma cacao
Thecc1EG037135 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1935840-1940839 Theobroma cacao
Thecc1EG037135 10.0kb upstream 10.0kb upstream 11969 true scaffold_9: 1940840-1952808 Theobroma cacao
Thecc1EG037135 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1942809-1952808 Theobroma cacao
Thecc1EG037135 10.0kb downstream 10.0kb downstream 11969 true scaffold_9: 1930840-1942808 Theobroma cacao
Thecc1EG037135 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1930840-1940839 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842082 5264 Brassicales-Malvales View MSA
124323226 5266 SBM View MSA
124250399 5268 Malvidae View MSA
124074316 5270 Rosid View MSA
123753290 5271 Pentapetalae View MSA
122797673 5272 Eudicot View MSA
122050943 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain