Gene : Thecc1EG037219 T. cacao v1.1
Defline:  (1 of 3) 1.1.1.40 - Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) / Pyruvic-malic carboxylase Genomic Order:  446
Name:  ? Thecc1EG037219 Secondary Identifier:  ? PAC:27426012
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLUCONEO-PWY Theobroma cacao pathologic  
Tcacao PWY-241 Theobroma cacao pathologic  
Tcacao PWY-7117 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037219 0.5kb upstream 0.5kb upstream 7136 true scaffold_9: 2392253-2399388 Theobroma cacao
Thecc1EG037219 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2392253-2392752 Theobroma cacao
Thecc1EG037219 0.5kb downstream 0.5kb downstream 7136 true scaffold_9: 2392753-2399888 Theobroma cacao
Thecc1EG037219 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2399389-2399888 Theobroma cacao
Thecc1EG037219 1.0kb upstream 1.0kb upstream 7636 true scaffold_9: 2391753-2399388 Theobroma cacao
Thecc1EG037219 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2391753-2392752 Theobroma cacao
Thecc1EG037219 1.0kb downstream 1.0kb downstream 7636 true scaffold_9: 2392753-2400388 Theobroma cacao
Thecc1EG037219 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2399389-2400388 Theobroma cacao
Thecc1EG037219 2.0kb upstream 2.0kb upstream 8636 true scaffold_9: 2390753-2399388 Theobroma cacao
Thecc1EG037219 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2390753-2392752 Theobroma cacao
Thecc1EG037219 2.0kb downstream 2.0kb downstream 8636 true scaffold_9: 2392753-2401388 Theobroma cacao
Thecc1EG037219 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2399389-2401388 Theobroma cacao
Thecc1EG037219 5.0kb upstream 5.0kb upstream 11636 true scaffold_9: 2387753-2399388 Theobroma cacao
Thecc1EG037219 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2387753-2392752 Theobroma cacao
Thecc1EG037219 5.0kb downstream 5.0kb downstream 11636 true scaffold_9: 2392753-2404388 Theobroma cacao
Thecc1EG037219 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2399389-2404388 Theobroma cacao
Thecc1EG037219 10.0kb upstream 10.0kb upstream 16636 true scaffold_9: 2382753-2399388 Theobroma cacao
Thecc1EG037219 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2382753-2392752 Theobroma cacao
Thecc1EG037219 10.0kb downstream 10.0kb downstream 16636 true scaffold_9: 2392753-2409388 Theobroma cacao
Thecc1EG037219 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2399389-2409388 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837048 5264 Brassicales-Malvales View MSA
124345373 5266 SBM View MSA
124247919 5268 Malvidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain