Gene : Thecc1EG037202 T. cacao v1.1
Defline:  (1 of 1) PTHR12649//PTHR12649:SF12 - PEPTIDYL-TRNA HYDROLASE 2 // PEPTIDYL-TRNA HYDROLASE II (PTH2) FAMILY PROTEIN Genomic Order:  430
Name:  ? Thecc1EG037202 Secondary Identifier:  ? PAC:27427210
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037202 0.5kb upstream 0.5kb upstream 3166 true scaffold_9: 2301703-2304868 Theobroma cacao
Thecc1EG037202 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2301703-2302202 Theobroma cacao
Thecc1EG037202 0.5kb downstream 0.5kb downstream 3166 true scaffold_9: 2302203-2305368 Theobroma cacao
Thecc1EG037202 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2304869-2305368 Theobroma cacao
Thecc1EG037202 1.0kb upstream 1.0kb upstream 3666 true scaffold_9: 2301203-2304868 Theobroma cacao
Thecc1EG037202 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2301203-2302202 Theobroma cacao
Thecc1EG037202 1.0kb downstream 1.0kb downstream 3666 true scaffold_9: 2302203-2305868 Theobroma cacao
Thecc1EG037202 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2304869-2305868 Theobroma cacao
Thecc1EG037202 2.0kb upstream 2.0kb upstream 4666 true scaffold_9: 2300203-2304868 Theobroma cacao
Thecc1EG037202 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2300203-2302202 Theobroma cacao
Thecc1EG037202 2.0kb downstream 2.0kb downstream 4666 true scaffold_9: 2302203-2306868 Theobroma cacao
Thecc1EG037202 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2304869-2306868 Theobroma cacao
Thecc1EG037202 5.0kb upstream 5.0kb upstream 7666 true scaffold_9: 2297203-2304868 Theobroma cacao
Thecc1EG037202 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2297203-2302202 Theobroma cacao
Thecc1EG037202 5.0kb downstream 5.0kb downstream 7666 true scaffold_9: 2302203-2309868 Theobroma cacao
Thecc1EG037202 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2304869-2309868 Theobroma cacao
Thecc1EG037202 10.0kb upstream 10.0kb upstream 12666 true scaffold_9: 2292203-2304868 Theobroma cacao
Thecc1EG037202 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2292203-2302202 Theobroma cacao
Thecc1EG037202 10.0kb downstream 10.0kb downstream 12666 true scaffold_9: 2302203-2314868 Theobroma cacao
Thecc1EG037202 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2304869-2314868 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041458 5273 Angiosperm View MSA
123829822 5264 Brassicales-Malvales View MSA
124341966 5266 SBM View MSA
124240247 5268 Malvidae View MSA
124065431 5270 Rosid View MSA
123745404 5271 Pentapetalae View MSA
122792467 5272 Eudicot View MSA
121347943 5274 Embryophyte View MSA
123426949 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain