Gene : Thecc1EG037547 T. cacao v1.1
Defline:  (1 of 1) PTHR22893//PTHR22893:SF67 - NADH OXIDOREDUCTASE-RELATED // 12-OXOPHYTODIENOATE REDUCTASE 3 Genomic Order:  746
Name:  ? Thecc1EG037547 Secondary Identifier:  ? PAC:27428538
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-735 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037547 0.5kb upstream 0.5kb upstream 4570 true scaffold_9: 4056382-4060951 Theobroma cacao
Thecc1EG037547 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4060452-4060951 Theobroma cacao
Thecc1EG037547 0.5kb downstream 0.5kb downstream 4570 true scaffold_9: 4055882-4060451 Theobroma cacao
Thecc1EG037547 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4055882-4056381 Theobroma cacao
Thecc1EG037547 1.0kb upstream 1.0kb upstream 5070 true scaffold_9: 4056382-4061451 Theobroma cacao
Thecc1EG037547 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4060452-4061451 Theobroma cacao
Thecc1EG037547 1.0kb downstream 1.0kb downstream 5070 true scaffold_9: 4055382-4060451 Theobroma cacao
Thecc1EG037547 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4055382-4056381 Theobroma cacao
Thecc1EG037547 2.0kb upstream 2.0kb upstream 6070 true scaffold_9: 4056382-4062451 Theobroma cacao
Thecc1EG037547 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4060452-4062451 Theobroma cacao
Thecc1EG037547 2.0kb downstream 2.0kb downstream 6070 true scaffold_9: 4054382-4060451 Theobroma cacao
Thecc1EG037547 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4054382-4056381 Theobroma cacao
Thecc1EG037547 5.0kb upstream 5.0kb upstream 9070 true scaffold_9: 4056382-4065451 Theobroma cacao
Thecc1EG037547 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4060452-4065451 Theobroma cacao
Thecc1EG037547 5.0kb downstream 5.0kb downstream 9070 true scaffold_9: 4051382-4060451 Theobroma cacao
Thecc1EG037547 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4051382-4056381 Theobroma cacao
Thecc1EG037547 10.0kb upstream 10.0kb upstream 14070 true scaffold_9: 4056382-4070451 Theobroma cacao
Thecc1EG037547 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4060452-4070451 Theobroma cacao
Thecc1EG037547 10.0kb downstream 10.0kb downstream 14070 true scaffold_9: 4046382-4060451 Theobroma cacao
Thecc1EG037547 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4046382-4056381 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829939 5264 Brassicales-Malvales View MSA
124321640 5266 SBM View MSA
124251945 5268 Malvidae View MSA
124067438 5270 Rosid View MSA
123752843 5271 Pentapetalae View MSA
122793200 5272 Eudicot View MSA
122045758 5273 Angiosperm View MSA
121351640 5274 Embryophyte View MSA
123428487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain