Gene : Thecc1EG037508 T. cacao v1.1
Defline:  (1 of 1) 5.3.1.23 - S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase Genomic Order:  710
Name:  ? Thecc1EG037508 Secondary Identifier:  ? PAC:27431022
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4361 Theobroma cacao pathologic  
Tcacao PWY-7270 Theobroma cacao pathologic  
Tcacao PWY-7528 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037508 0.5kb upstream 0.5kb upstream 4046 true scaffold_9: 3867173-3871218 Theobroma cacao
Thecc1EG037508 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3867173-3867672 Theobroma cacao
Thecc1EG037508 0.5kb downstream 0.5kb downstream 4046 true scaffold_9: 3867673-3871718 Theobroma cacao
Thecc1EG037508 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3871219-3871718 Theobroma cacao
Thecc1EG037508 1.0kb upstream 1.0kb upstream 4546 true scaffold_9: 3866673-3871218 Theobroma cacao
Thecc1EG037508 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3866673-3867672 Theobroma cacao
Thecc1EG037508 1.0kb downstream 1.0kb downstream 4546 true scaffold_9: 3867673-3872218 Theobroma cacao
Thecc1EG037508 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3871219-3872218 Theobroma cacao
Thecc1EG037508 2.0kb upstream 2.0kb upstream 5546 true scaffold_9: 3865673-3871218 Theobroma cacao
Thecc1EG037508 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3865673-3867672 Theobroma cacao
Thecc1EG037508 2.0kb downstream 2.0kb downstream 5546 true scaffold_9: 3867673-3873218 Theobroma cacao
Thecc1EG037508 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3871219-3873218 Theobroma cacao
Thecc1EG037508 5.0kb upstream 5.0kb upstream 8546 true scaffold_9: 3862673-3871218 Theobroma cacao
Thecc1EG037508 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3862673-3867672 Theobroma cacao
Thecc1EG037508 5.0kb downstream 5.0kb downstream 8546 true scaffold_9: 3867673-3876218 Theobroma cacao
Thecc1EG037508 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3871219-3876218 Theobroma cacao
Thecc1EG037508 10.0kb upstream 10.0kb upstream 13546 true scaffold_9: 3857673-3871218 Theobroma cacao
Thecc1EG037508 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3857673-3867672 Theobroma cacao
Thecc1EG037508 10.0kb downstream 10.0kb downstream 13546 true scaffold_9: 3867673-3881218 Theobroma cacao
Thecc1EG037508 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3871219-3881218 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829438 5264 Brassicales-Malvales View MSA
124345905 5266 SBM View MSA
124238790 5268 Malvidae View MSA
124060423 5270 Rosid View MSA
123740094 5271 Pentapetalae View MSA
122788864 5272 Eudicot View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain