Gene : Thecc1EG037477 T. cacao v1.1
Defline:  Cysteine and histidine-rich protein 1 Genomic Order:  681
Name:  ? Thecc1EG037477 Secondary Identifier:  ? PAC:27426290
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037477 0.5kb upstream 0.5kb upstream 1966 true scaffold_9: 3692697-3694662 Theobroma cacao
Thecc1EG037477 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3692697-3693196 Theobroma cacao
Thecc1EG037477 0.5kb downstream 0.5kb downstream 1966 true scaffold_9: 3693197-3695162 Theobroma cacao
Thecc1EG037477 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3694663-3695162 Theobroma cacao
Thecc1EG037477 1.0kb upstream 1.0kb upstream 2466 true scaffold_9: 3692197-3694662 Theobroma cacao
Thecc1EG037477 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3692197-3693196 Theobroma cacao
Thecc1EG037477 1.0kb downstream 1.0kb downstream 2466 true scaffold_9: 3693197-3695662 Theobroma cacao
Thecc1EG037477 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3694663-3695662 Theobroma cacao
Thecc1EG037477 2.0kb upstream 2.0kb upstream 3466 true scaffold_9: 3691197-3694662 Theobroma cacao
Thecc1EG037477 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3691197-3693196 Theobroma cacao
Thecc1EG037477 2.0kb downstream 2.0kb downstream 3466 true scaffold_9: 3693197-3696662 Theobroma cacao
Thecc1EG037477 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3694663-3696662 Theobroma cacao
Thecc1EG037477 5.0kb upstream 5.0kb upstream 6466 true scaffold_9: 3688197-3694662 Theobroma cacao
Thecc1EG037477 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3688197-3693196 Theobroma cacao
Thecc1EG037477 5.0kb downstream 5.0kb downstream 6466 true scaffold_9: 3693197-3699662 Theobroma cacao
Thecc1EG037477 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3694663-3699662 Theobroma cacao
Thecc1EG037477 10.0kb upstream 10.0kb upstream 11466 true scaffold_9: 3683197-3694662 Theobroma cacao
Thecc1EG037477 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3683197-3693196 Theobroma cacao
Thecc1EG037477 10.0kb downstream 10.0kb downstream 11466 true scaffold_9: 3693197-3704662 Theobroma cacao
Thecc1EG037477 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3694663-3704662 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836010 5264 Brassicales-Malvales View MSA
124342980 5266 SBM View MSA
124246955 5268 Malvidae View MSA
124065995 5270 Rosid View MSA
123741901 5271 Pentapetalae View MSA
122793758 5272 Eudicot View MSA
122045771 5273 Angiosperm View MSA
121310499 5274 Embryophyte View MSA
123347967 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain