Protein Family : PF00190 - Cupin (Cupin_1) 124342980

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  21

21 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g028671m.g   C. sinensis v1.1 916   scaffold00001: 4345500-4346415
AT5G20790   A. thaliana TAIR10 744   Chr5: 7039911-7040654
AT3G43110   A. thaliana TAIR10 857   Chr3: 15091611-15092467
Thhalv10014753m.g   E. salsugineum v1.0 788   scaffold_2: 7189563-7190350
Thhalv10002680m.g   E. salsugineum v1.0 701   scaffold_4: 13034829-13035529
Ciclev10024151m.g   C. clementina v1.0 609   scaffold_3: 46556475-46557083
Gorai.001G017300   G. raimondii v2.1 805   Chr01: 1593058-1593862
Gorai.009G037400   G. raimondii v2.1 597   Chr09: 2749748-2750344
Gorai.010G091500   G. raimondii v2.1 558   Chr10: 14466643-14467200
Thecc1EG037477 Cysteine and histidine-rich protein 1 T. cacao v1.1 1466   scaffold_9: 3693197-3694662
Cagra.18107s0001   C. grandiflora v1.1 563   Scaffold18107: 431-993
Cagra.1796s0002   C. grandiflora v1.1 988   Scaffold1796: 4599-5586
Brara.B00907   B. rapa FPsc v1.3 941   A02: 4265864-4266804
Brara.C00950   B. rapa FPsc v1.3 576   A03: 4434999-4435574
Brara.J01549   B. rapa FPsc v1.3 787   A10: 13480333-13481119
Bostr.0556s0664   B. stricta v1.2 765   Scaffold556: 4202552-4203316
Bostr.26527s0130   B. stricta v1.2 868   Scaffold26527: 857811-858678
AL5G21230   A. lyrata v2.1 760   scaffold_5: 9922503-9923262
AL6G32310   A. lyrata v2.1 1045   scaffold_6: 8816039-8817083
Carub.0005s0898   C. rubella v1.1 823   scaffold_5: 5220754-5221576
Carub.0006s1909   C. rubella v1.1 639   scaffold_6: 7063273-7063911

21 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT5G20790.1 A. thaliana TAIR10 124342980 PF00190 - Cupin (Cupin_1) 2 5266 SBM
Gorai.010G091500.1 G. raimondii v2.1 124342980 PF00190 - Cupin (Cupin_1) 3 5266 SBM
Gorai.001G017300.1 G. raimondii v2.1 124342980 PF00190 - Cupin (Cupin_1) 3 5266 SBM
Brara.J01549.1.p B. rapa FPsc v1.3 124342980 PF00190 - Cupin (Cupin_1) 3 5266 SBM
AL6G32310.t1 A. lyrata v2.1 124342980 PF00190 - Cupin (Cupin_1) 2 5266 SBM
Carub.0005s0898.1.p C. rubella v1.1 124342980 PF00190 - Cupin (Cupin_1) 2 5266 SBM
orange1.1g028671m C. sinensis v1.1 124342980 PF00190 - Cupin (Cupin_1) 1 5266 SBM
AT3G43110.1 A. thaliana TAIR10 124342980 PF00190 - Cupin (Cupin_1) 2 5266 SBM
Thhalv10002680m E. salsugineum v1.0 124342980 PF00190 - Cupin (Cupin_1) 2 5266 SBM
Thhalv10014753m E. salsugineum v1.0 124342980 PF00190 - Cupin (Cupin_1) 2 5266 SBM
Ciclev10024151m C. clementina v1.0 124342980 PF00190 - Cupin (Cupin_1) 1 5266 SBM
Gorai.009G037400.1 G. raimondii v2.1 124342980 PF00190 - Cupin (Cupin_1) 3 5266 SBM
Thecc1EG037477t1 T. cacao v1.1 124342980 PF00190 - Cupin (Cupin_1) 1 5266 SBM
Cagra.1796s0002.1.p C. grandiflora v1.1 124342980 PF00190 - Cupin (Cupin_1) 2 5266 SBM
Cagra.18107s0001.1.p C. grandiflora v1.1 124342980 PF00190 - Cupin (Cupin_1) 2 5266 SBM
Brara.C00950.1.p B. rapa FPsc v1.3 124342980 PF00190 - Cupin (Cupin_1) 3 5266 SBM
Brara.B00907.1.p B. rapa FPsc v1.3 124342980 PF00190 - Cupin (Cupin_1) 3 5266 SBM
Bostr.26527s0130.1.p B. stricta v1.2 124342980 PF00190 - Cupin (Cupin_1) 2 5266 SBM
Bostr.0556s0664.1.p B. stricta v1.2 124342980 PF00190 - Cupin (Cupin_1) 2 5266 SBM
AL5G21230.t1 A. lyrata v2.1 124342980 PF00190 - Cupin (Cupin_1) 2 5266 SBM
Carub.0006s1909.1.p C. rubella v1.1 124342980 PF00190 - Cupin (Cupin_1) 2 5266 SBM