Gene : Thecc1EG037740 T. cacao v1.1
Defline:  (1 of 2) PTHR31513//PTHR31513:SF1 - FAMILY NOT NAMED // GLYCINE-RICH PROTEIN Genomic Order:  923
Name:  ? Thecc1EG037740 Secondary Identifier:  ? PAC:27425686
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037740 0.5kb upstream 0.5kb upstream 13750 true scaffold_9: 5064466-5078215 Theobroma cacao
Thecc1EG037740 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5064466-5064965 Theobroma cacao
Thecc1EG037740 0.5kb downstream 0.5kb downstream 13750 true scaffold_9: 5064966-5078715 Theobroma cacao
Thecc1EG037740 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5078216-5078715 Theobroma cacao
Thecc1EG037740 1.0kb upstream 1.0kb upstream 14250 true scaffold_9: 5063966-5078215 Theobroma cacao
Thecc1EG037740 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5063966-5064965 Theobroma cacao
Thecc1EG037740 1.0kb downstream 1.0kb downstream 14250 true scaffold_9: 5064966-5079215 Theobroma cacao
Thecc1EG037740 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5078216-5079215 Theobroma cacao
Thecc1EG037740 2.0kb upstream 2.0kb upstream 15250 true scaffold_9: 5062966-5078215 Theobroma cacao
Thecc1EG037740 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5062966-5064965 Theobroma cacao
Thecc1EG037740 2.0kb downstream 2.0kb downstream 15250 true scaffold_9: 5064966-5080215 Theobroma cacao
Thecc1EG037740 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5078216-5080215 Theobroma cacao
Thecc1EG037740 5.0kb upstream 5.0kb upstream 18250 true scaffold_9: 5059966-5078215 Theobroma cacao
Thecc1EG037740 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5059966-5064965 Theobroma cacao
Thecc1EG037740 5.0kb downstream 5.0kb downstream 18250 true scaffold_9: 5064966-5083215 Theobroma cacao
Thecc1EG037740 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5078216-5083215 Theobroma cacao
Thecc1EG037740 10.0kb upstream 10.0kb upstream 23250 true scaffold_9: 5054966-5078215 Theobroma cacao
Thecc1EG037740 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5054966-5064965 Theobroma cacao
Thecc1EG037740 10.0kb downstream 10.0kb downstream 23250 true scaffold_9: 5064966-5088215 Theobroma cacao
Thecc1EG037740 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5078216-5088215 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824868 5264 Brassicales-Malvales View MSA
124348027 5266 SBM View MSA
124248830 5268 Malvidae View MSA
124073287 5270 Rosid View MSA
123741641 5271 Pentapetalae View MSA
122787770 5272 Eudicot View MSA
122043442 5273 Angiosperm View MSA
121344544 5274 Embryophyte View MSA
123380062 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain