Gene : Thecc1EG037932 T. cacao v1.1
Defline:  (1 of 1) PTHR23245//PTHR23245:SF36 - UNCHARACTERIZED // TRNA (GUANINE(37)-N1)-METHYLTRANSFERASE Genomic Order:  1097
Name:  ? Thecc1EG037932 Secondary Identifier:  ? PAC:27430318
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6829 Theobroma cacao pathologic  
Tcacao PWY-7283 Theobroma cacao pathologic  
Tcacao PWY-7286 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037932 0.5kb upstream 0.5kb upstream 5433 true scaffold_9: 6102143-6107575 Theobroma cacao
Thecc1EG037932 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6102143-6102642 Theobroma cacao
Thecc1EG037932 0.5kb downstream 0.5kb downstream 5433 true scaffold_9: 6102643-6108075 Theobroma cacao
Thecc1EG037932 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6107576-6108075 Theobroma cacao
Thecc1EG037932 1.0kb upstream 1.0kb upstream 5933 true scaffold_9: 6101643-6107575 Theobroma cacao
Thecc1EG037932 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6101643-6102642 Theobroma cacao
Thecc1EG037932 1.0kb downstream 1.0kb downstream 5933 true scaffold_9: 6102643-6108575 Theobroma cacao
Thecc1EG037932 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6107576-6108575 Theobroma cacao
Thecc1EG037932 2.0kb upstream 2.0kb upstream 6933 true scaffold_9: 6100643-6107575 Theobroma cacao
Thecc1EG037932 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6100643-6102642 Theobroma cacao
Thecc1EG037932 2.0kb downstream 2.0kb downstream 6933 true scaffold_9: 6102643-6109575 Theobroma cacao
Thecc1EG037932 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6107576-6109575 Theobroma cacao
Thecc1EG037932 5.0kb upstream 5.0kb upstream 9933 true scaffold_9: 6097643-6107575 Theobroma cacao
Thecc1EG037932 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6097643-6102642 Theobroma cacao
Thecc1EG037932 5.0kb downstream 5.0kb downstream 9933 true scaffold_9: 6102643-6112575 Theobroma cacao
Thecc1EG037932 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6107576-6112575 Theobroma cacao
Thecc1EG037932 10.0kb upstream 10.0kb upstream 14933 true scaffold_9: 6092643-6107575 Theobroma cacao
Thecc1EG037932 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6092643-6102642 Theobroma cacao
Thecc1EG037932 10.0kb downstream 10.0kb downstream 14933 true scaffold_9: 6102643-6117575 Theobroma cacao
Thecc1EG037932 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6107576-6117575 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828672 5264 Brassicales-Malvales View MSA
124321545 5266 SBM View MSA
124241986 5268 Malvidae View MSA
124073928 5270 Rosid View MSA
123747956 5271 Pentapetalae View MSA
122788813 5272 Eudicot View MSA
122045692 5273 Angiosperm View MSA
121347346 5274 Embryophyte View MSA
123426085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain