Gene : Thecc1EG038034 T. cacao v1.1

Defline:  (1 of 1) K01663 - glutamine amidotransferase / cyclase (HIS7) Genomic Order:  1179
Name:  ? Thecc1EG038034 Secondary Identifier:  ? PAC:27430655

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038034 0.5kb upstream 0.5kb upstream 12307 true scaffold_9: 6609393-6621699 Theobroma cacao
Thecc1EG038034 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 6609393-6609892 Theobroma cacao
Thecc1EG038034 0.5kb downstream 0.5kb downstream 12307 true scaffold_9: 6609893-6622199 Theobroma cacao
Thecc1EG038034 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 6621700-6622199 Theobroma cacao
Thecc1EG038034 1.0kb upstream 1.0kb upstream 12807 true scaffold_9: 6608893-6621699 Theobroma cacao
Thecc1EG038034 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 6608893-6609892 Theobroma cacao
Thecc1EG038034 1.0kb downstream 1.0kb downstream 12807 true scaffold_9: 6609893-6622699 Theobroma cacao
Thecc1EG038034 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 6621700-6622699 Theobroma cacao
Thecc1EG038034 2.0kb upstream 2.0kb upstream 13807 true scaffold_9: 6607893-6621699 Theobroma cacao
Thecc1EG038034 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 6607893-6609892 Theobroma cacao
Thecc1EG038034 2.0kb downstream 2.0kb downstream 13807 true scaffold_9: 6609893-6623699 Theobroma cacao
Thecc1EG038034 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 6621700-6623699 Theobroma cacao
Thecc1EG038034 5.0kb upstream 5.0kb upstream 16807 true scaffold_9: 6604893-6621699 Theobroma cacao
Thecc1EG038034 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 6604893-6609892 Theobroma cacao
Thecc1EG038034 5.0kb downstream 5.0kb downstream 16807 true scaffold_9: 6609893-6626699 Theobroma cacao
Thecc1EG038034 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 6621700-6626699 Theobroma cacao
Thecc1EG038034 10.0kb upstream 10.0kb upstream 21807 true scaffold_9: 6599893-6621699 Theobroma cacao
Thecc1EG038034 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6599893-6609892 Theobroma cacao
Thecc1EG038034 10.0kb downstream 10.0kb downstream 21807 true scaffold_9: 6609893-6631699 Theobroma cacao
Thecc1EG038034 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 6621700-6631699 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833038 5264 Brassicales-Malvales View MSA
124345279 5266 SBM View MSA
124243114 5268 Malvidae View MSA
124066754 5270 Rosid View MSA
123743623 5271 Pentapetalae View MSA
122792259 5272 Eudicot View MSA
122046043 5273 Angiosperm View MSA
121347063 5274 Embryophyte View MSA
123424776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain