Gene : Thecc1EG038166 T. cacao v1.1

Defline:  (1 of 1) PTHR20855//PTHR20855:SF32 - ADIPOR/PROGESTIN RECEPTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1288
Name:  ? Thecc1EG038166 Secondary Identifier:  ? PAC:27429369

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038166 0.5kb upstream 0.5kb upstream 3902 true scaffold_9: 7450212-7454113 Theobroma cacao
Thecc1EG038166 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 7453614-7454113 Theobroma cacao
Thecc1EG038166 0.5kb downstream 0.5kb downstream 3902 true scaffold_9: 7449712-7453613 Theobroma cacao
Thecc1EG038166 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 7449712-7450211 Theobroma cacao
Thecc1EG038166 1.0kb upstream 1.0kb upstream 4402 true scaffold_9: 7450212-7454613 Theobroma cacao
Thecc1EG038166 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 7453614-7454613 Theobroma cacao
Thecc1EG038166 1.0kb downstream 1.0kb downstream 4402 true scaffold_9: 7449212-7453613 Theobroma cacao
Thecc1EG038166 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 7449212-7450211 Theobroma cacao
Thecc1EG038166 2.0kb upstream 2.0kb upstream 5402 true scaffold_9: 7450212-7455613 Theobroma cacao
Thecc1EG038166 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 7453614-7455613 Theobroma cacao
Thecc1EG038166 2.0kb downstream 2.0kb downstream 5402 true scaffold_9: 7448212-7453613 Theobroma cacao
Thecc1EG038166 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 7448212-7450211 Theobroma cacao
Thecc1EG038166 5.0kb upstream 5.0kb upstream 8402 true scaffold_9: 7450212-7458613 Theobroma cacao
Thecc1EG038166 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 7453614-7458613 Theobroma cacao
Thecc1EG038166 5.0kb downstream 5.0kb downstream 8402 true scaffold_9: 7445212-7453613 Theobroma cacao
Thecc1EG038166 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 7445212-7450211 Theobroma cacao
Thecc1EG038166 10.0kb upstream 10.0kb upstream 13402 true scaffold_9: 7450212-7463613 Theobroma cacao
Thecc1EG038166 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 7453614-7463613 Theobroma cacao
Thecc1EG038166 10.0kb downstream 10.0kb downstream 13402 true scaffold_9: 7440212-7453613 Theobroma cacao
Thecc1EG038166 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 7440212-7450211 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835200 5264 Brassicales-Malvales View MSA
124322014 5266 SBM View MSA
124250613 5268 Malvidae View MSA
124066042 5270 Rosid View MSA
123752354 5271 Pentapetalae View MSA
122795335 5272 Eudicot View MSA
122047253 5273 Angiosperm View MSA
121349872 5274 Embryophyte View MSA
123428275 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain