Gene : Thecc1EG038601 T. cacao v1.1
Defline:  (1 of 1) PTHR10906//PTHR10906:SF9 - SECY/SEC61-ALPHA FAMILY MEMBER // PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC Genomic Order:  1575
Name:  ? Thecc1EG038601 Secondary Identifier:  ? PAC:27429855
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038601 0.5kb upstream 0.5kb upstream 6915 true scaffold_9: 10596741-10603655 Theobroma cacao
Thecc1EG038601 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 10603156-10603655 Theobroma cacao
Thecc1EG038601 0.5kb downstream 0.5kb downstream 6915 true scaffold_9: 10596241-10603155 Theobroma cacao
Thecc1EG038601 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 10596241-10596740 Theobroma cacao
Thecc1EG038601 1.0kb upstream 1.0kb upstream 7415 true scaffold_9: 10596741-10604155 Theobroma cacao
Thecc1EG038601 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 10603156-10604155 Theobroma cacao
Thecc1EG038601 1.0kb downstream 1.0kb downstream 7415 true scaffold_9: 10595741-10603155 Theobroma cacao
Thecc1EG038601 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 10595741-10596740 Theobroma cacao
Thecc1EG038601 2.0kb upstream 2.0kb upstream 8415 true scaffold_9: 10596741-10605155 Theobroma cacao
Thecc1EG038601 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 10603156-10605155 Theobroma cacao
Thecc1EG038601 2.0kb downstream 2.0kb downstream 8415 true scaffold_9: 10594741-10603155 Theobroma cacao
Thecc1EG038601 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 10594741-10596740 Theobroma cacao
Thecc1EG038601 5.0kb upstream 5.0kb upstream 11415 true scaffold_9: 10596741-10608155 Theobroma cacao
Thecc1EG038601 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 10603156-10608155 Theobroma cacao
Thecc1EG038601 5.0kb downstream 5.0kb downstream 11415 true scaffold_9: 10591741-10603155 Theobroma cacao
Thecc1EG038601 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 10591741-10596740 Theobroma cacao
Thecc1EG038601 10.0kb upstream 10.0kb upstream 16415 true scaffold_9: 10596741-10613155 Theobroma cacao
Thecc1EG038601 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 10603156-10613155 Theobroma cacao
Thecc1EG038601 10.0kb downstream 10.0kb downstream 16415 true scaffold_9: 10586741-10603155 Theobroma cacao
Thecc1EG038601 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 10586741-10596740 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829565 5264 Brassicales-Malvales View MSA
124340391 5266 SBM View MSA
124241538 5268 Malvidae View MSA
124063230 5270 Rosid View MSA
123738518 5271 Pentapetalae View MSA
122788956 5272 Eudicot View MSA
122046659 5273 Angiosperm View MSA
121346087 5274 Embryophyte View MSA
123425781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain