Gene : Thecc1EG039694 T. cacao v1.1
Defline:  (1 of 1) PTHR11751//PTHR11751:SF435 - SUBGROUP I AMINOTRANSFERASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  1939
Name:  ? Thecc1EG039694 Secondary Identifier:  ? PAC:27430152
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao POLYAMINSYN3-PWY Theobroma cacao pathologic  
Tcacao PWY-43 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039694 0.5kb upstream 0.5kb upstream 4036 true scaffold_9: 22115733-22119768 Theobroma cacao
Thecc1EG039694 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 22119269-22119768 Theobroma cacao
Thecc1EG039694 0.5kb downstream 0.5kb downstream 4036 true scaffold_9: 22115233-22119268 Theobroma cacao
Thecc1EG039694 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 22115233-22115732 Theobroma cacao
Thecc1EG039694 1.0kb upstream 1.0kb upstream 4536 true scaffold_9: 22115733-22120268 Theobroma cacao
Thecc1EG039694 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 22119269-22120268 Theobroma cacao
Thecc1EG039694 1.0kb downstream 1.0kb downstream 4536 true scaffold_9: 22114733-22119268 Theobroma cacao
Thecc1EG039694 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 22114733-22115732 Theobroma cacao
Thecc1EG039694 2.0kb upstream 2.0kb upstream 5536 true scaffold_9: 22115733-22121268 Theobroma cacao
Thecc1EG039694 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 22119269-22121268 Theobroma cacao
Thecc1EG039694 2.0kb downstream 2.0kb downstream 5536 true scaffold_9: 22113733-22119268 Theobroma cacao
Thecc1EG039694 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 22113733-22115732 Theobroma cacao
Thecc1EG039694 5.0kb upstream 5.0kb upstream 8536 true scaffold_9: 22115733-22124268 Theobroma cacao
Thecc1EG039694 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 22119269-22124268 Theobroma cacao
Thecc1EG039694 5.0kb downstream 5.0kb downstream 8536 true scaffold_9: 22110733-22119268 Theobroma cacao
Thecc1EG039694 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 22110733-22115732 Theobroma cacao
Thecc1EG039694 10.0kb upstream 10.0kb upstream 13536 true scaffold_9: 22115733-22129268 Theobroma cacao
Thecc1EG039694 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 22119269-22129268 Theobroma cacao
Thecc1EG039694 10.0kb downstream 10.0kb downstream 13536 true scaffold_9: 22105733-22119268 Theobroma cacao
Thecc1EG039694 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 22105733-22115732 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825575 5264 Brassicales-Malvales View MSA
124320659 5266 SBM View MSA
124248348 5268 Malvidae View MSA
124050697 5270 Rosid View MSA
123742620 5271 Pentapetalae View MSA
122796978 5272 Eudicot View MSA
122048497 5273 Angiosperm View MSA
121348486 5274 Embryophyte View MSA
123425712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain