Gene : Thecc1EG039696 T. cacao v1.1
Defline:  Serine-rich protein-related (65%P) Genomic Order:  1940
Name:  ? Thecc1EG039696 Secondary Identifier:  ? PAC:27427348
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039696 0.5kb upstream 0.5kb upstream 1927 true scaffold_9: 22132471-22134397 Theobroma cacao
Thecc1EG039696 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 22133898-22134397 Theobroma cacao
Thecc1EG039696 0.5kb downstream 0.5kb downstream 1927 true scaffold_9: 22131971-22133897 Theobroma cacao
Thecc1EG039696 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 22131971-22132470 Theobroma cacao
Thecc1EG039696 1.0kb upstream 1.0kb upstream 2427 true scaffold_9: 22132471-22134897 Theobroma cacao
Thecc1EG039696 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 22133898-22134897 Theobroma cacao
Thecc1EG039696 1.0kb downstream 1.0kb downstream 2427 true scaffold_9: 22131471-22133897 Theobroma cacao
Thecc1EG039696 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 22131471-22132470 Theobroma cacao
Thecc1EG039696 2.0kb upstream 2.0kb upstream 3427 true scaffold_9: 22132471-22135897 Theobroma cacao
Thecc1EG039696 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 22133898-22135897 Theobroma cacao
Thecc1EG039696 2.0kb downstream 2.0kb downstream 3427 true scaffold_9: 22130471-22133897 Theobroma cacao
Thecc1EG039696 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 22130471-22132470 Theobroma cacao
Thecc1EG039696 5.0kb upstream 5.0kb upstream 6427 true scaffold_9: 22132471-22138897 Theobroma cacao
Thecc1EG039696 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 22133898-22138897 Theobroma cacao
Thecc1EG039696 5.0kb downstream 5.0kb downstream 6427 true scaffold_9: 22127471-22133897 Theobroma cacao
Thecc1EG039696 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 22127471-22132470 Theobroma cacao
Thecc1EG039696 10.0kb upstream 10.0kb upstream 11427 true scaffold_9: 22132471-22143897 Theobroma cacao
Thecc1EG039696 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 22133898-22143897 Theobroma cacao
Thecc1EG039696 10.0kb downstream 10.0kb downstream 11427 true scaffold_9: 22122471-22133897 Theobroma cacao
Thecc1EG039696 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 22122471-22132470 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840229 5264 Brassicales-Malvales View MSA
124349285 5266 SBM View MSA
124254015 5268 Malvidae View MSA
124073291 5270 Rosid View MSA
123746276 5271 Pentapetalae View MSA
122792590 5272 Eudicot View MSA
122050175 5273 Angiosperm View MSA
121348989 5274 Embryophyte View MSA
123381114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain