Gene : Thecc1EG039967 T. cacao v1.1
Defline:  Nuclear pore complex protein Genomic Order:  2020
Name:  ? Thecc1EG039967 Secondary Identifier:  ? PAC:27427855
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG039967 0.5kb upstream 0.5kb upstream 23423 true scaffold_9: 25494733-25518155 Theobroma cacao
Thecc1EG039967 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 25517656-25518155 Theobroma cacao
Thecc1EG039967 0.5kb downstream 0.5kb downstream 23423 true scaffold_9: 25494233-25517655 Theobroma cacao
Thecc1EG039967 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 25494233-25494732 Theobroma cacao
Thecc1EG039967 1.0kb upstream 1.0kb upstream 23923 true scaffold_9: 25494733-25518655 Theobroma cacao
Thecc1EG039967 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 25517656-25518655 Theobroma cacao
Thecc1EG039967 1.0kb downstream 1.0kb downstream 23923 true scaffold_9: 25493733-25517655 Theobroma cacao
Thecc1EG039967 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 25493733-25494732 Theobroma cacao
Thecc1EG039967 2.0kb upstream 2.0kb upstream 24923 true scaffold_9: 25494733-25519655 Theobroma cacao
Thecc1EG039967 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 25517656-25519655 Theobroma cacao
Thecc1EG039967 2.0kb downstream 2.0kb downstream 24923 true scaffold_9: 25492733-25517655 Theobroma cacao
Thecc1EG039967 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 25492733-25494732 Theobroma cacao
Thecc1EG039967 5.0kb upstream 5.0kb upstream 27923 true scaffold_9: 25494733-25522655 Theobroma cacao
Thecc1EG039967 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 25517656-25522655 Theobroma cacao
Thecc1EG039967 5.0kb downstream 5.0kb downstream 27923 true scaffold_9: 25489733-25517655 Theobroma cacao
Thecc1EG039967 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 25489733-25494732 Theobroma cacao
Thecc1EG039967 10.0kb upstream 10.0kb upstream 32923 true scaffold_9: 25494733-25527655 Theobroma cacao
Thecc1EG039967 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 25517656-25527655 Theobroma cacao
Thecc1EG039967 10.0kb downstream 10.0kb downstream 32923 true scaffold_9: 25484733-25517655 Theobroma cacao
Thecc1EG039967 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 25484733-25494732 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831775 5264 Brassicales-Malvales View MSA
124345767 5266 SBM View MSA
124238833 5268 Malvidae View MSA
124067866 5270 Rosid View MSA
123739810 5271 Pentapetalae View MSA
122786045 5272 Eudicot View MSA
122042091 5273 Angiosperm View MSA
121347011 5274 Embryophyte View MSA
123424066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain