Gene : Thecc1EG040539 T. cacao v1.1
Defline:  DNA double-strand break repair rad50 ATPase (69%P) Genomic Order:  2223
Name:  ? Thecc1EG040539 Secondary Identifier:  ? PAC:27426997
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040539 0.5kb upstream 0.5kb upstream 4236 true scaffold_9: 31237901-31242136 Theobroma cacao
Thecc1EG040539 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 31241637-31242136 Theobroma cacao
Thecc1EG040539 0.5kb downstream 0.5kb downstream 4236 true scaffold_9: 31237401-31241636 Theobroma cacao
Thecc1EG040539 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 31237401-31237900 Theobroma cacao
Thecc1EG040539 1.0kb upstream 1.0kb upstream 4736 true scaffold_9: 31237901-31242636 Theobroma cacao
Thecc1EG040539 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 31241637-31242636 Theobroma cacao
Thecc1EG040539 1.0kb downstream 1.0kb downstream 4736 true scaffold_9: 31236901-31241636 Theobroma cacao
Thecc1EG040539 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 31236901-31237900 Theobroma cacao
Thecc1EG040539 2.0kb upstream 2.0kb upstream 5736 true scaffold_9: 31237901-31243636 Theobroma cacao
Thecc1EG040539 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 31241637-31243636 Theobroma cacao
Thecc1EG040539 2.0kb downstream 2.0kb downstream 5736 true scaffold_9: 31235901-31241636 Theobroma cacao
Thecc1EG040539 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 31235901-31237900 Theobroma cacao
Thecc1EG040539 5.0kb upstream 5.0kb upstream 8736 true scaffold_9: 31237901-31246636 Theobroma cacao
Thecc1EG040539 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 31241637-31246636 Theobroma cacao
Thecc1EG040539 5.0kb downstream 5.0kb downstream 8736 true scaffold_9: 31232901-31241636 Theobroma cacao
Thecc1EG040539 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 31232901-31237900 Theobroma cacao
Thecc1EG040539 10.0kb upstream 10.0kb upstream 13736 true scaffold_9: 31237901-31251636 Theobroma cacao
Thecc1EG040539 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 31241637-31251636 Theobroma cacao
Thecc1EG040539 10.0kb downstream 10.0kb downstream 13736 true scaffold_9: 31227901-31241636 Theobroma cacao
Thecc1EG040539 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 31227901-31237900 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840417 5264 Brassicales-Malvales View MSA
124340571 5266 SBM View MSA
124237829 5268 Malvidae View MSA
124065011 5270 Rosid View MSA
123739994 5271 Pentapetalae View MSA
122786278 5272 Eudicot View MSA
122049110 5273 Angiosperm View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain