Gene : Thecc1EG040428 T. cacao v1.1

Defline:  (1 of 13) PF00069//PF01453 - Protein kinase domain (Pkinase) // D-mannose binding lectin (B_lectin) Genomic Order:  2173
Name:  ? Thecc1EG040428 Secondary Identifier:  ? PAC:27430911

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040428 0.5kb upstream 0.5kb upstream 3897 true scaffold_9: 30167563-30171459 Theobroma cacao
Thecc1EG040428 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 30167563-30168062 Theobroma cacao
Thecc1EG040428 0.5kb downstream 0.5kb downstream 3897 true scaffold_9: 30168063-30171959 Theobroma cacao
Thecc1EG040428 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 30171460-30171959 Theobroma cacao
Thecc1EG040428 1.0kb upstream 1.0kb upstream 4397 true scaffold_9: 30167063-30171459 Theobroma cacao
Thecc1EG040428 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 30167063-30168062 Theobroma cacao
Thecc1EG040428 1.0kb downstream 1.0kb downstream 4397 true scaffold_9: 30168063-30172459 Theobroma cacao
Thecc1EG040428 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 30171460-30172459 Theobroma cacao
Thecc1EG040428 2.0kb upstream 2.0kb upstream 5397 true scaffold_9: 30166063-30171459 Theobroma cacao
Thecc1EG040428 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 30166063-30168062 Theobroma cacao
Thecc1EG040428 2.0kb downstream 2.0kb downstream 5397 true scaffold_9: 30168063-30173459 Theobroma cacao
Thecc1EG040428 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 30171460-30173459 Theobroma cacao
Thecc1EG040428 5.0kb upstream 5.0kb upstream 8397 true scaffold_9: 30163063-30171459 Theobroma cacao
Thecc1EG040428 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 30163063-30168062 Theobroma cacao
Thecc1EG040428 5.0kb downstream 5.0kb downstream 8397 true scaffold_9: 30168063-30176459 Theobroma cacao
Thecc1EG040428 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 30171460-30176459 Theobroma cacao
Thecc1EG040428 10.0kb upstream 10.0kb upstream 13397 true scaffold_9: 30158063-30171459 Theobroma cacao
Thecc1EG040428 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 30158063-30168062 Theobroma cacao
Thecc1EG040428 10.0kb downstream 10.0kb downstream 13397 true scaffold_9: 30168063-30181459 Theobroma cacao
Thecc1EG040428 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 30171460-30181459 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837498 5264 Brassicales-Malvales View MSA
124350965 5266 SBM View MSA
124253467 5268 Malvidae View MSA
124074422 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain