Gene : Thecc1EG040804 T. cacao v1.1
Defline:  (1 of 1) K12882 - nuclear cap-binding protein subunit 1 (NCBP1, CBP80) Genomic Order:  2380
Name:  ? Thecc1EG040804 Secondary Identifier:  ? PAC:27431082
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040804 0.5kb upstream 0.5kb upstream 14876 true scaffold_9: 33523208-33538083 Theobroma cacao
Thecc1EG040804 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 33537584-33538083 Theobroma cacao
Thecc1EG040804 0.5kb downstream 0.5kb downstream 14876 true scaffold_9: 33522708-33537583 Theobroma cacao
Thecc1EG040804 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 33522708-33523207 Theobroma cacao
Thecc1EG040804 1.0kb upstream 1.0kb upstream 15376 true scaffold_9: 33523208-33538583 Theobroma cacao
Thecc1EG040804 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 33537584-33538583 Theobroma cacao
Thecc1EG040804 1.0kb downstream 1.0kb downstream 15376 true scaffold_9: 33522208-33537583 Theobroma cacao
Thecc1EG040804 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 33522208-33523207 Theobroma cacao
Thecc1EG040804 2.0kb upstream 2.0kb upstream 16376 true scaffold_9: 33523208-33539583 Theobroma cacao
Thecc1EG040804 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 33537584-33539583 Theobroma cacao
Thecc1EG040804 2.0kb downstream 2.0kb downstream 16376 true scaffold_9: 33521208-33537583 Theobroma cacao
Thecc1EG040804 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 33521208-33523207 Theobroma cacao
Thecc1EG040804 5.0kb upstream 5.0kb upstream 19376 true scaffold_9: 33523208-33542583 Theobroma cacao
Thecc1EG040804 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 33537584-33542583 Theobroma cacao
Thecc1EG040804 5.0kb downstream 5.0kb downstream 19376 true scaffold_9: 33518208-33537583 Theobroma cacao
Thecc1EG040804 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 33518208-33523207 Theobroma cacao
Thecc1EG040804 10.0kb upstream 10.0kb upstream 24376 true scaffold_9: 33523208-33547583 Theobroma cacao
Thecc1EG040804 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 33537584-33547583 Theobroma cacao
Thecc1EG040804 10.0kb downstream 10.0kb downstream 24376 true scaffold_9: 33513208-33537583 Theobroma cacao
Thecc1EG040804 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 33513208-33523207 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829748 5264 Brassicales-Malvales View MSA
124342378 5266 SBM View MSA
124242798 5268 Malvidae View MSA
124063675 5270 Rosid View MSA
123738542 5271 Pentapetalae View MSA
122788025 5272 Eudicot View MSA
122046271 5273 Angiosperm View MSA
121347142 5274 Embryophyte View MSA
123424721 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain