Gene : Thecc1EG040769 T. cacao v1.1
Defline:  (1 of 3) K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Genomic Order:  2351
Name:  ? Thecc1EG040769 Secondary Identifier:  ? PAC:27427804
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040769 0.5kb upstream 0.5kb upstream 4563 true scaffold_9: 33313178-33317740 Theobroma cacao
Thecc1EG040769 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 33313178-33313677 Theobroma cacao
Thecc1EG040769 0.5kb downstream 0.5kb downstream 4563 true scaffold_9: 33313678-33318240 Theobroma cacao
Thecc1EG040769 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 33317741-33318240 Theobroma cacao
Thecc1EG040769 1.0kb upstream 1.0kb upstream 5063 true scaffold_9: 33312678-33317740 Theobroma cacao
Thecc1EG040769 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 33312678-33313677 Theobroma cacao
Thecc1EG040769 1.0kb downstream 1.0kb downstream 5063 true scaffold_9: 33313678-33318740 Theobroma cacao
Thecc1EG040769 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 33317741-33318740 Theobroma cacao
Thecc1EG040769 2.0kb upstream 2.0kb upstream 6063 true scaffold_9: 33311678-33317740 Theobroma cacao
Thecc1EG040769 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 33311678-33313677 Theobroma cacao
Thecc1EG040769 2.0kb downstream 2.0kb downstream 6063 true scaffold_9: 33313678-33319740 Theobroma cacao
Thecc1EG040769 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 33317741-33319740 Theobroma cacao
Thecc1EG040769 5.0kb upstream 5.0kb upstream 9063 true scaffold_9: 33308678-33317740 Theobroma cacao
Thecc1EG040769 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 33308678-33313677 Theobroma cacao
Thecc1EG040769 5.0kb downstream 5.0kb downstream 9063 true scaffold_9: 33313678-33322740 Theobroma cacao
Thecc1EG040769 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 33317741-33322740 Theobroma cacao
Thecc1EG040769 10.0kb upstream 10.0kb upstream 14063 true scaffold_9: 33303678-33317740 Theobroma cacao
Thecc1EG040769 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 33303678-33313677 Theobroma cacao
Thecc1EG040769 10.0kb downstream 10.0kb downstream 14063 true scaffold_9: 33313678-33327740 Theobroma cacao
Thecc1EG040769 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 33317741-33327740 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823098 5264 Brassicales-Malvales Singleton cluster - no MSA
124319199 5266 SBM Singleton cluster - no MSA
124249067 5268 Malvidae View MSA
124072963 5270 Rosid View MSA
123751611 5271 Pentapetalae View MSA
122797589 5272 Eudicot View MSA
122045994 5273 Angiosperm View MSA
121350308 5274 Embryophyte View MSA
123427568 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain