Gene : Thecc1EG040738 T. cacao v1.1
Defline:  (1 of 1) PTHR10366//PTHR10366:SF244//PTHR10366:SF362 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // CINNAMYL-ALCOHOL DEHYDROGENASE-RELATED // ALCOHOL DEHYDROGENASE-RELATED Genomic Order:  2332
Name:  ? Thecc1EG040738 Secondary Identifier:  ? PAC:27428384
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-361 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040738 0.5kb upstream 0.5kb upstream 7724 true scaffold_9: 32997382-33005105 Theobroma cacao
Thecc1EG040738 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 33004606-33005105 Theobroma cacao
Thecc1EG040738 0.5kb downstream 0.5kb downstream 7724 true scaffold_9: 32996882-33004605 Theobroma cacao
Thecc1EG040738 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 32996882-32997381 Theobroma cacao
Thecc1EG040738 1.0kb upstream 1.0kb upstream 8224 true scaffold_9: 32997382-33005605 Theobroma cacao
Thecc1EG040738 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 33004606-33005605 Theobroma cacao
Thecc1EG040738 1.0kb downstream 1.0kb downstream 8224 true scaffold_9: 32996382-33004605 Theobroma cacao
Thecc1EG040738 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 32996382-32997381 Theobroma cacao
Thecc1EG040738 2.0kb upstream 2.0kb upstream 9224 true scaffold_9: 32997382-33006605 Theobroma cacao
Thecc1EG040738 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 33004606-33006605 Theobroma cacao
Thecc1EG040738 2.0kb downstream 2.0kb downstream 9224 true scaffold_9: 32995382-33004605 Theobroma cacao
Thecc1EG040738 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 32995382-32997381 Theobroma cacao
Thecc1EG040738 5.0kb upstream 5.0kb upstream 12224 true scaffold_9: 32997382-33009605 Theobroma cacao
Thecc1EG040738 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 33004606-33009605 Theobroma cacao
Thecc1EG040738 5.0kb downstream 5.0kb downstream 12224 true scaffold_9: 32992382-33004605 Theobroma cacao
Thecc1EG040738 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 32992382-32997381 Theobroma cacao
Thecc1EG040738 10.0kb upstream 10.0kb upstream 17224 true scaffold_9: 32997382-33014605 Theobroma cacao
Thecc1EG040738 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 33004606-33014605 Theobroma cacao
Thecc1EG040738 10.0kb downstream 10.0kb downstream 17224 true scaffold_9: 32987382-33004605 Theobroma cacao
Thecc1EG040738 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 32987382-32997381 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837668 5264 Brassicales-Malvales View MSA
124343860 5266 SBM View MSA
124238633 5268 Malvidae View MSA
124067100 5270 Rosid View MSA
123752094 5271 Pentapetalae View MSA
122797549 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain