Gene : Thecc1EG040905 T. cacao v1.1

Defline:  (1 of 1) PTHR23176//PTHR23176:SF44 - RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2444
Name:  ? Thecc1EG040905 Secondary Identifier:  ? PAC:27425774

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040905 0.5kb upstream 0.5kb upstream 25575 true scaffold_9: 34248367-34273941 Theobroma cacao
Thecc1EG040905 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 34248367-34248866 Theobroma cacao
Thecc1EG040905 0.5kb downstream 0.5kb downstream 25575 true scaffold_9: 34248867-34274441 Theobroma cacao
Thecc1EG040905 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 34273942-34274441 Theobroma cacao
Thecc1EG040905 1.0kb upstream 1.0kb upstream 26075 true scaffold_9: 34247867-34273941 Theobroma cacao
Thecc1EG040905 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 34247867-34248866 Theobroma cacao
Thecc1EG040905 1.0kb downstream 1.0kb downstream 26075 true scaffold_9: 34248867-34274941 Theobroma cacao
Thecc1EG040905 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 34273942-34274941 Theobroma cacao
Thecc1EG040905 2.0kb upstream 2.0kb upstream 27075 true scaffold_9: 34246867-34273941 Theobroma cacao
Thecc1EG040905 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 34246867-34248866 Theobroma cacao
Thecc1EG040905 2.0kb downstream 2.0kb downstream 27075 true scaffold_9: 34248867-34275941 Theobroma cacao
Thecc1EG040905 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 34273942-34275941 Theobroma cacao
Thecc1EG040905 5.0kb upstream 5.0kb upstream 30075 true scaffold_9: 34243867-34273941 Theobroma cacao
Thecc1EG040905 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 34243867-34248866 Theobroma cacao
Thecc1EG040905 5.0kb downstream 5.0kb downstream 30075 true scaffold_9: 34248867-34278941 Theobroma cacao
Thecc1EG040905 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 34273942-34278941 Theobroma cacao
Thecc1EG040905 10.0kb upstream 10.0kb upstream 35075 true scaffold_9: 34238867-34273941 Theobroma cacao
Thecc1EG040905 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 34238867-34248866 Theobroma cacao
Thecc1EG040905 10.0kb downstream 10.0kb downstream 35075 true scaffold_9: 34248867-34283941 Theobroma cacao
Thecc1EG040905 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 34273942-34283941 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831692 5264 Brassicales-Malvales View MSA
124343857 5266 SBM View MSA
124252587 5268 Malvidae View MSA
124067310 5270 Rosid View MSA
123749156 5271 Pentapetalae View MSA
122794752 5272 Eudicot View MSA
122042223 5273 Angiosperm View MSA
121347338 5274 Embryophyte View MSA
123380531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain