Gene : Thecc1EG040878 T. cacao v1.1

Defline:  (1 of 8) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  2428
Name:  ? Thecc1EG040878 Secondary Identifier:  ? PAC:27430771

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040878 0.5kb upstream 0.5kb upstream 2293 true scaffold_9: 34099457-34101749 Theobroma cacao
Thecc1EG040878 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 34099457-34099956 Theobroma cacao
Thecc1EG040878 0.5kb downstream 0.5kb downstream 2293 true scaffold_9: 34099957-34102249 Theobroma cacao
Thecc1EG040878 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 34101750-34102249 Theobroma cacao
Thecc1EG040878 1.0kb upstream 1.0kb upstream 2793 true scaffold_9: 34098957-34101749 Theobroma cacao
Thecc1EG040878 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 34098957-34099956 Theobroma cacao
Thecc1EG040878 1.0kb downstream 1.0kb downstream 2793 true scaffold_9: 34099957-34102749 Theobroma cacao
Thecc1EG040878 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 34101750-34102749 Theobroma cacao
Thecc1EG040878 2.0kb upstream 2.0kb upstream 3793 true scaffold_9: 34097957-34101749 Theobroma cacao
Thecc1EG040878 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 34097957-34099956 Theobroma cacao
Thecc1EG040878 2.0kb downstream 2.0kb downstream 3793 true scaffold_9: 34099957-34103749 Theobroma cacao
Thecc1EG040878 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 34101750-34103749 Theobroma cacao
Thecc1EG040878 5.0kb upstream 5.0kb upstream 6793 true scaffold_9: 34094957-34101749 Theobroma cacao
Thecc1EG040878 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 34094957-34099956 Theobroma cacao
Thecc1EG040878 5.0kb downstream 5.0kb downstream 6793 true scaffold_9: 34099957-34106749 Theobroma cacao
Thecc1EG040878 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 34101750-34106749 Theobroma cacao
Thecc1EG040878 10.0kb upstream 10.0kb upstream 11793 true scaffold_9: 34089957-34101749 Theobroma cacao
Thecc1EG040878 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 34089957-34099956 Theobroma cacao
Thecc1EG040878 10.0kb downstream 10.0kb downstream 11793 true scaffold_9: 34099957-34111749 Theobroma cacao
Thecc1EG040878 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 34101750-34111749 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826555 5264 Brassicales-Malvales View MSA
124349381 5266 SBM View MSA
124245700 5268 Malvidae View MSA
124050555 5270 Rosid View MSA
123742674 5271 Pentapetalae View MSA
122795296 5272 Eudicot View MSA
122050621 5273 Angiosperm View MSA
121312030 5274 Embryophyte View MSA
123349243 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain