Gene : Thecc1EG040857 T. cacao v1.1
Defline:  (1 of 1) PTHR10293:SF37 - MONOTHIOL GLUTAREDOXIN-S14, CHLOROPLASTIC Genomic Order:  2412
Name:  ? Thecc1EG040857 Secondary Identifier:  ? PAC:27427147
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao THIOREDOX-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040857 0.5kb upstream 0.5kb upstream 19197 true scaffold_9: 33987782-34006978 Theobroma cacao
Thecc1EG040857 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 33987782-33988281 Theobroma cacao
Thecc1EG040857 0.5kb downstream 0.5kb downstream 19197 true scaffold_9: 33988282-34007478 Theobroma cacao
Thecc1EG040857 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 34006979-34007478 Theobroma cacao
Thecc1EG040857 1.0kb upstream 1.0kb upstream 19697 true scaffold_9: 33987282-34006978 Theobroma cacao
Thecc1EG040857 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 33987282-33988281 Theobroma cacao
Thecc1EG040857 1.0kb downstream 1.0kb downstream 19697 true scaffold_9: 33988282-34007978 Theobroma cacao
Thecc1EG040857 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 34006979-34007978 Theobroma cacao
Thecc1EG040857 2.0kb upstream 2.0kb upstream 20697 true scaffold_9: 33986282-34006978 Theobroma cacao
Thecc1EG040857 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 33986282-33988281 Theobroma cacao
Thecc1EG040857 2.0kb downstream 2.0kb downstream 20697 true scaffold_9: 33988282-34008978 Theobroma cacao
Thecc1EG040857 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 34006979-34008978 Theobroma cacao
Thecc1EG040857 5.0kb upstream 5.0kb upstream 23697 true scaffold_9: 33983282-34006978 Theobroma cacao
Thecc1EG040857 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 33983282-33988281 Theobroma cacao
Thecc1EG040857 5.0kb downstream 5.0kb downstream 23697 true scaffold_9: 33988282-34011978 Theobroma cacao
Thecc1EG040857 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 34006979-34011978 Theobroma cacao
Thecc1EG040857 10.0kb upstream 10.0kb upstream 28697 true scaffold_9: 33978282-34006978 Theobroma cacao
Thecc1EG040857 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 33978282-33988281 Theobroma cacao
Thecc1EG040857 10.0kb downstream 10.0kb downstream 28697 true scaffold_9: 33988282-34016978 Theobroma cacao
Thecc1EG040857 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 34006979-34016978 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831038 5264 Brassicales-Malvales View MSA
124350033 5266 SBM View MSA
124242489 5268 Malvidae View MSA
124074597 5270 Rosid View MSA
123743063 5271 Pentapetalae View MSA
122787324 5272 Eudicot View MSA
122043030 5273 Angiosperm View MSA
121347328 5274 Embryophyte View MSA
123424474 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain