Gene : Thecc1EG041132 T. cacao v1.1
Defline:  (1 of 1) PTHR10617//PTHR10617:SF118 - ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE // SUBFAMILY NOT NAMED Genomic Order:  2594
Name:  ? Thecc1EG041132 Secondary Identifier:  ? PAC:27431115
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5063 Theobroma cacao pathologic  
Tcacao PWY-5064 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041132 0.5kb upstream 0.5kb upstream 2173 true scaffold_9: 35656367-35658539 Theobroma cacao
Thecc1EG041132 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 35656367-35656866 Theobroma cacao
Thecc1EG041132 0.5kb downstream 0.5kb downstream 2173 true scaffold_9: 35656867-35659039 Theobroma cacao
Thecc1EG041132 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 35658540-35659039 Theobroma cacao
Thecc1EG041132 1.0kb upstream 1.0kb upstream 2673 true scaffold_9: 35655867-35658539 Theobroma cacao
Thecc1EG041132 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 35655867-35656866 Theobroma cacao
Thecc1EG041132 1.0kb downstream 1.0kb downstream 2673 true scaffold_9: 35656867-35659539 Theobroma cacao
Thecc1EG041132 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 35658540-35659539 Theobroma cacao
Thecc1EG041132 2.0kb upstream 2.0kb upstream 3673 true scaffold_9: 35654867-35658539 Theobroma cacao
Thecc1EG041132 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 35654867-35656866 Theobroma cacao
Thecc1EG041132 2.0kb downstream 2.0kb downstream 3673 true scaffold_9: 35656867-35660539 Theobroma cacao
Thecc1EG041132 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 35658540-35660539 Theobroma cacao
Thecc1EG041132 5.0kb upstream 5.0kb upstream 6673 true scaffold_9: 35651867-35658539 Theobroma cacao
Thecc1EG041132 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 35651867-35656866 Theobroma cacao
Thecc1EG041132 5.0kb downstream 5.0kb downstream 6673 true scaffold_9: 35656867-35663539 Theobroma cacao
Thecc1EG041132 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 35658540-35663539 Theobroma cacao
Thecc1EG041132 10.0kb upstream 10.0kb upstream 11673 true scaffold_9: 35646867-35658539 Theobroma cacao
Thecc1EG041132 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 35646867-35656866 Theobroma cacao
Thecc1EG041132 10.0kb downstream 10.0kb downstream 11673 true scaffold_9: 35656867-35668539 Theobroma cacao
Thecc1EG041132 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 35658540-35668539 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825298 5264 Brassicales-Malvales View MSA
124347768 5266 SBM View MSA
124246501 5268 Malvidae View MSA
124070478 5270 Rosid View MSA
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain