Gene : Thecc1EG041222 T. cacao v1.1
Defline:  (1 of 1) PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2668
Name:  ? Thecc1EG041222 Secondary Identifier:  ? PAC:27430791
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041222 0.5kb upstream 0.5kb upstream 17200 true scaffold_9: 36232514-36249713 Theobroma cacao
Thecc1EG041222 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 36232514-36233013 Theobroma cacao
Thecc1EG041222 0.5kb downstream 0.5kb downstream 17200 true scaffold_9: 36233014-36250213 Theobroma cacao
Thecc1EG041222 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 36249714-36250213 Theobroma cacao
Thecc1EG041222 1.0kb upstream 1.0kb upstream 17700 true scaffold_9: 36232014-36249713 Theobroma cacao
Thecc1EG041222 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 36232014-36233013 Theobroma cacao
Thecc1EG041222 1.0kb downstream 1.0kb downstream 17700 true scaffold_9: 36233014-36250713 Theobroma cacao
Thecc1EG041222 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 36249714-36250713 Theobroma cacao
Thecc1EG041222 2.0kb upstream 2.0kb upstream 18700 true scaffold_9: 36231014-36249713 Theobroma cacao
Thecc1EG041222 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 36231014-36233013 Theobroma cacao
Thecc1EG041222 2.0kb downstream 2.0kb downstream 18700 true scaffold_9: 36233014-36251713 Theobroma cacao
Thecc1EG041222 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 36249714-36251713 Theobroma cacao
Thecc1EG041222 5.0kb upstream 5.0kb upstream 21700 true scaffold_9: 36228014-36249713 Theobroma cacao
Thecc1EG041222 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 36228014-36233013 Theobroma cacao
Thecc1EG041222 5.0kb downstream 5.0kb downstream 21700 true scaffold_9: 36233014-36254713 Theobroma cacao
Thecc1EG041222 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 36249714-36254713 Theobroma cacao
Thecc1EG041222 10.0kb upstream 10.0kb upstream 26700 true scaffold_9: 36223014-36249713 Theobroma cacao
Thecc1EG041222 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 36223014-36233013 Theobroma cacao
Thecc1EG041222 10.0kb downstream 10.0kb downstream 26700 true scaffold_9: 36233014-36259713 Theobroma cacao
Thecc1EG041222 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 36249714-36259713 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825424 5264 Brassicales-Malvales View MSA
124348443 5266 SBM View MSA
124245970 5268 Malvidae View MSA
124070455 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain