Gene : Thecc1EG041517 T. cacao v1.1
Defline:  (1 of 2) PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Genomic Order:  2874
Name:  ? Thecc1EG041517 Secondary Identifier:  ? PAC:27430503
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041517 0.5kb upstream 0.5kb upstream 3811 true scaffold_9: 38117440-38121250 Theobroma cacao
Thecc1EG041517 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 38117440-38117939 Theobroma cacao
Thecc1EG041517 0.5kb downstream 0.5kb downstream 3811 true scaffold_9: 38117940-38121750 Theobroma cacao
Thecc1EG041517 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 38121251-38121750 Theobroma cacao
Thecc1EG041517 1.0kb upstream 1.0kb upstream 4311 true scaffold_9: 38116940-38121250 Theobroma cacao
Thecc1EG041517 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 38116940-38117939 Theobroma cacao
Thecc1EG041517 1.0kb downstream 1.0kb downstream 4311 true scaffold_9: 38117940-38122250 Theobroma cacao
Thecc1EG041517 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 38121251-38122250 Theobroma cacao
Thecc1EG041517 2.0kb upstream 2.0kb upstream 5311 true scaffold_9: 38115940-38121250 Theobroma cacao
Thecc1EG041517 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 38115940-38117939 Theobroma cacao
Thecc1EG041517 2.0kb downstream 2.0kb downstream 5311 true scaffold_9: 38117940-38123250 Theobroma cacao
Thecc1EG041517 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 38121251-38123250 Theobroma cacao
Thecc1EG041517 5.0kb upstream 5.0kb upstream 8311 true scaffold_9: 38112940-38121250 Theobroma cacao
Thecc1EG041517 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 38112940-38117939 Theobroma cacao
Thecc1EG041517 5.0kb downstream 5.0kb downstream 8311 true scaffold_9: 38117940-38126250 Theobroma cacao
Thecc1EG041517 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 38121251-38126250 Theobroma cacao
Thecc1EG041517 10.0kb upstream 10.0kb upstream 13311 true scaffold_9: 38107940-38121250 Theobroma cacao
Thecc1EG041517 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 38107940-38117939 Theobroma cacao
Thecc1EG041517 10.0kb downstream 10.0kb downstream 13311 true scaffold_9: 38117940-38131250 Theobroma cacao
Thecc1EG041517 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 38121251-38131250 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839233 5264 Brassicales-Malvales View MSA
124343902 5266 SBM View MSA
124252646 5268 Malvidae View MSA
124068201 5270 Rosid View MSA
123749750 5271 Pentapetalae View MSA
122797243 5272 Eudicot View MSA
122051478 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121349885 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain