Gene : Thecc1EG041626 T. cacao v1.1

Defline:  (1 of 5) K07300 - Ca2+:H+ antiporter (chaA, CAX) Genomic Order:  2970
Name:  ? Thecc1EG041626 Secondary Identifier:  ? PAC:27428424

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041626 0.5kb upstream 0.5kb upstream 3845 true scaffold_9: 38803890-38807734 Theobroma cacao
Thecc1EG041626 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 38803890-38804389 Theobroma cacao
Thecc1EG041626 0.5kb downstream 0.5kb downstream 3845 true scaffold_9: 38804390-38808234 Theobroma cacao
Thecc1EG041626 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 38807735-38808234 Theobroma cacao
Thecc1EG041626 1.0kb upstream 1.0kb upstream 4345 true scaffold_9: 38803390-38807734 Theobroma cacao
Thecc1EG041626 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 38803390-38804389 Theobroma cacao
Thecc1EG041626 1.0kb downstream 1.0kb downstream 4345 true scaffold_9: 38804390-38808734 Theobroma cacao
Thecc1EG041626 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 38807735-38808734 Theobroma cacao
Thecc1EG041626 2.0kb upstream 2.0kb upstream 5345 true scaffold_9: 38802390-38807734 Theobroma cacao
Thecc1EG041626 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 38802390-38804389 Theobroma cacao
Thecc1EG041626 2.0kb downstream 2.0kb downstream 5345 true scaffold_9: 38804390-38809734 Theobroma cacao
Thecc1EG041626 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 38807735-38809734 Theobroma cacao
Thecc1EG041626 5.0kb upstream 5.0kb upstream 8345 true scaffold_9: 38799390-38807734 Theobroma cacao
Thecc1EG041626 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 38799390-38804389 Theobroma cacao
Thecc1EG041626 5.0kb downstream 5.0kb downstream 8345 true scaffold_9: 38804390-38812734 Theobroma cacao
Thecc1EG041626 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 38807735-38812734 Theobroma cacao
Thecc1EG041626 10.0kb upstream 10.0kb upstream 13345 true scaffold_9: 38794390-38807734 Theobroma cacao
Thecc1EG041626 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 38794390-38804389 Theobroma cacao
Thecc1EG041626 10.0kb downstream 10.0kb downstream 13345 true scaffold_9: 38804390-38817734 Theobroma cacao
Thecc1EG041626 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 38807735-38817734 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825614 5264 Brassicales-Malvales View MSA
124348850 5266 SBM View MSA
124252974 5268 Malvidae View MSA
124071576 5270 Rosid View MSA
123745086 5271 Pentapetalae View MSA
122771361 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain