Gene : Thecc1EG041869 T. cacao v1.1
Defline:  (1 of 1) PTHR12428//PTHR12428:SF19 - OXA1 // INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC Genomic Order:  3189
Name:  ? Thecc1EG041869 Secondary Identifier:  ? PAC:27429902
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041869 0.5kb upstream 0.5kb upstream 8986 true scaffold_9: 39886484-39895469 Theobroma cacao
Thecc1EG041869 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39886484-39886983 Theobroma cacao
Thecc1EG041869 0.5kb downstream 0.5kb downstream 8986 true scaffold_9: 39886984-39895969 Theobroma cacao
Thecc1EG041869 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39895470-39895969 Theobroma cacao
Thecc1EG041869 1.0kb upstream 1.0kb upstream 9486 true scaffold_9: 39885984-39895469 Theobroma cacao
Thecc1EG041869 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39885984-39886983 Theobroma cacao
Thecc1EG041869 1.0kb downstream 1.0kb downstream 9486 true scaffold_9: 39886984-39896469 Theobroma cacao
Thecc1EG041869 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39895470-39896469 Theobroma cacao
Thecc1EG041869 2.0kb upstream 2.0kb upstream 10486 true scaffold_9: 39884984-39895469 Theobroma cacao
Thecc1EG041869 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39884984-39886983 Theobroma cacao
Thecc1EG041869 2.0kb downstream 2.0kb downstream 10486 true scaffold_9: 39886984-39897469 Theobroma cacao
Thecc1EG041869 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39895470-39897469 Theobroma cacao
Thecc1EG041869 5.0kb upstream 5.0kb upstream 13486 true scaffold_9: 39881984-39895469 Theobroma cacao
Thecc1EG041869 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39881984-39886983 Theobroma cacao
Thecc1EG041869 5.0kb downstream 5.0kb downstream 13486 true scaffold_9: 39886984-39900469 Theobroma cacao
Thecc1EG041869 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39895470-39900469 Theobroma cacao
Thecc1EG041869 10.0kb upstream 10.0kb upstream 18486 true scaffold_9: 39876984-39895469 Theobroma cacao
Thecc1EG041869 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39876984-39886983 Theobroma cacao
Thecc1EG041869 10.0kb downstream 10.0kb downstream 18486 true scaffold_9: 39886984-39905469 Theobroma cacao
Thecc1EG041869 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39895470-39905469 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832520 5264 Brassicales-Malvales View MSA
124346396 5266 SBM View MSA
124243172 5268 Malvidae View MSA
124062830 5270 Rosid View MSA
123743978 5271 Pentapetalae View MSA
122791056 5272 Eudicot View MSA
122045068 5273 Angiosperm View MSA
121347702 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain