Gene : Thecc1EG041791 T. cacao v1.1

Defline:  (1 of 215) PF00249 - Myb-like DNA-binding domain (Myb_DNA-binding) Genomic Order:  3117
Name:  ? Thecc1EG041791 Secondary Identifier:  ? PAC:27429251

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041791 0.5kb upstream 0.5kb upstream 4669 true scaffold_9: 39517140-39521808 Theobroma cacao
Thecc1EG041791 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39521309-39521808 Theobroma cacao
Thecc1EG041791 0.5kb downstream 0.5kb downstream 4669 true scaffold_9: 39516640-39521308 Theobroma cacao
Thecc1EG041791 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39516640-39517139 Theobroma cacao
Thecc1EG041791 1.0kb upstream 1.0kb upstream 5169 true scaffold_9: 39517140-39522308 Theobroma cacao
Thecc1EG041791 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39521309-39522308 Theobroma cacao
Thecc1EG041791 1.0kb downstream 1.0kb downstream 5169 true scaffold_9: 39516140-39521308 Theobroma cacao
Thecc1EG041791 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39516140-39517139 Theobroma cacao
Thecc1EG041791 2.0kb upstream 2.0kb upstream 6169 true scaffold_9: 39517140-39523308 Theobroma cacao
Thecc1EG041791 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39521309-39523308 Theobroma cacao
Thecc1EG041791 2.0kb downstream 2.0kb downstream 6169 true scaffold_9: 39515140-39521308 Theobroma cacao
Thecc1EG041791 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39515140-39517139 Theobroma cacao
Thecc1EG041791 5.0kb upstream 5.0kb upstream 9169 true scaffold_9: 39517140-39526308 Theobroma cacao
Thecc1EG041791 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39521309-39526308 Theobroma cacao
Thecc1EG041791 5.0kb downstream 5.0kb downstream 9169 true scaffold_9: 39512140-39521308 Theobroma cacao
Thecc1EG041791 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39512140-39517139 Theobroma cacao
Thecc1EG041791 10.0kb upstream 10.0kb upstream 14169 true scaffold_9: 39517140-39531308 Theobroma cacao
Thecc1EG041791 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39521309-39531308 Theobroma cacao
Thecc1EG041791 10.0kb downstream 10.0kb downstream 14169 true scaffold_9: 39507140-39521308 Theobroma cacao
Thecc1EG041791 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39507140-39517139 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836484 5264 Brassicales-Malvales View MSA
124340592 5266 SBM View MSA
124244140 5268 Malvidae View MSA
124067582 5270 Rosid View MSA
123746852 5271 Pentapetalae View MSA
122794085 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain