Gene : Thecc1EG041710 T. cacao v1.1
Defline:  (1 of 2) PTHR21290//PTHR21290:SF29 - SPHINGOMYELIN SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  3045
Name:  ? Thecc1EG041710 Secondary Identifier:  ? PAC:27426483
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041710 0.5kb upstream 0.5kb upstream 4716 true scaffold_9: 39200723-39205438 Theobroma cacao
Thecc1EG041710 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 39204939-39205438 Theobroma cacao
Thecc1EG041710 0.5kb downstream 0.5kb downstream 4716 true scaffold_9: 39200223-39204938 Theobroma cacao
Thecc1EG041710 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 39200223-39200722 Theobroma cacao
Thecc1EG041710 1.0kb upstream 1.0kb upstream 5216 true scaffold_9: 39200723-39205938 Theobroma cacao
Thecc1EG041710 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 39204939-39205938 Theobroma cacao
Thecc1EG041710 1.0kb downstream 1.0kb downstream 5216 true scaffold_9: 39199723-39204938 Theobroma cacao
Thecc1EG041710 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 39199723-39200722 Theobroma cacao
Thecc1EG041710 2.0kb upstream 2.0kb upstream 6216 true scaffold_9: 39200723-39206938 Theobroma cacao
Thecc1EG041710 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 39204939-39206938 Theobroma cacao
Thecc1EG041710 2.0kb downstream 2.0kb downstream 6216 true scaffold_9: 39198723-39204938 Theobroma cacao
Thecc1EG041710 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 39198723-39200722 Theobroma cacao
Thecc1EG041710 5.0kb upstream 5.0kb upstream 9216 true scaffold_9: 39200723-39209938 Theobroma cacao
Thecc1EG041710 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 39204939-39209938 Theobroma cacao
Thecc1EG041710 5.0kb downstream 5.0kb downstream 9216 true scaffold_9: 39195723-39204938 Theobroma cacao
Thecc1EG041710 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 39195723-39200722 Theobroma cacao
Thecc1EG041710 10.0kb upstream 10.0kb upstream 14216 true scaffold_9: 39200723-39214938 Theobroma cacao
Thecc1EG041710 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 39204939-39214938 Theobroma cacao
Thecc1EG041710 10.0kb downstream 10.0kb downstream 14216 true scaffold_9: 39190723-39204938 Theobroma cacao
Thecc1EG041710 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 39190723-39200722 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838533 5264 Brassicales-Malvales View MSA
124344275 5266 SBM View MSA
124243094 5268 Malvidae View MSA
124064547 5270 Rosid View MSA
123744784 5271 Pentapetalae View MSA
122788943 5272 Eudicot View MSA
122046269 5273 Angiosperm View MSA
121346433 5274 Embryophyte View MSA
123427335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain