Gene : Thecc1EG042016 T. cacao v1.1
Defline:  (1 of 1) PTHR20973:SF0 - NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 1 HOMOLOG Genomic Order:  3314
Name:  ? Thecc1EG042016 Secondary Identifier:  ? PAC:27426634
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042016 0.5kb upstream 0.5kb upstream 2939 true scaffold_9: 40598727-40601665 Theobroma cacao
Thecc1EG042016 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40598727-40599226 Theobroma cacao
Thecc1EG042016 0.5kb downstream 0.5kb downstream 2939 true scaffold_9: 40599227-40602165 Theobroma cacao
Thecc1EG042016 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40601666-40602165 Theobroma cacao
Thecc1EG042016 1.0kb upstream 1.0kb upstream 3439 true scaffold_9: 40598227-40601665 Theobroma cacao
Thecc1EG042016 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40598227-40599226 Theobroma cacao
Thecc1EG042016 1.0kb downstream 1.0kb downstream 3439 true scaffold_9: 40599227-40602665 Theobroma cacao
Thecc1EG042016 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40601666-40602665 Theobroma cacao
Thecc1EG042016 2.0kb upstream 2.0kb upstream 4439 true scaffold_9: 40597227-40601665 Theobroma cacao
Thecc1EG042016 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40597227-40599226 Theobroma cacao
Thecc1EG042016 2.0kb downstream 2.0kb downstream 4439 true scaffold_9: 40599227-40603665 Theobroma cacao
Thecc1EG042016 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40601666-40603665 Theobroma cacao
Thecc1EG042016 5.0kb upstream 5.0kb upstream 7439 true scaffold_9: 40594227-40601665 Theobroma cacao
Thecc1EG042016 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40594227-40599226 Theobroma cacao
Thecc1EG042016 5.0kb downstream 5.0kb downstream 7439 true scaffold_9: 40599227-40606665 Theobroma cacao
Thecc1EG042016 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40601666-40606665 Theobroma cacao
Thecc1EG042016 10.0kb upstream 10.0kb upstream 12439 true scaffold_9: 40589227-40601665 Theobroma cacao
Thecc1EG042016 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40589227-40599226 Theobroma cacao
Thecc1EG042016 10.0kb downstream 10.0kb downstream 12439 true scaffold_9: 40599227-40611665 Theobroma cacao
Thecc1EG042016 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40601666-40611665 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828463 5264 Brassicales-Malvales View MSA
124344649 5266 SBM View MSA
124236948 5268 Malvidae View MSA
124060843 5270 Rosid View MSA
123738022 5271 Pentapetalae View MSA
122793177 5272 Eudicot View MSA
122042015 5273 Angiosperm View MSA
121350451 5274 Embryophyte View MSA
123426397 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain