Gene : Thecc1EG041958 T. cacao v1.1
Defline:  (1 of 2) PTHR11177//PTHR11177:SF190 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  3269
Name:  ? Thecc1EG041958 Secondary Identifier:  ? PAC:27431054
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6902 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041958 0.5kb upstream 0.5kb upstream 1340 true scaffold_9: 40329889-40331228 Theobroma cacao
Thecc1EG041958 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40330729-40331228 Theobroma cacao
Thecc1EG041958 0.5kb downstream 0.5kb downstream 1340 true scaffold_9: 40329389-40330728 Theobroma cacao
Thecc1EG041958 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40329389-40329888 Theobroma cacao
Thecc1EG041958 1.0kb upstream 1.0kb upstream 1840 true scaffold_9: 40329889-40331728 Theobroma cacao
Thecc1EG041958 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40330729-40331728 Theobroma cacao
Thecc1EG041958 1.0kb downstream 1.0kb downstream 1840 true scaffold_9: 40328889-40330728 Theobroma cacao
Thecc1EG041958 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40328889-40329888 Theobroma cacao
Thecc1EG041958 2.0kb upstream 2.0kb upstream 2840 true scaffold_9: 40329889-40332728 Theobroma cacao
Thecc1EG041958 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40330729-40332728 Theobroma cacao
Thecc1EG041958 2.0kb downstream 2.0kb downstream 2840 true scaffold_9: 40327889-40330728 Theobroma cacao
Thecc1EG041958 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40327889-40329888 Theobroma cacao
Thecc1EG041958 5.0kb upstream 5.0kb upstream 5840 true scaffold_9: 40329889-40335728 Theobroma cacao
Thecc1EG041958 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40330729-40335728 Theobroma cacao
Thecc1EG041958 5.0kb downstream 5.0kb downstream 5840 true scaffold_9: 40324889-40330728 Theobroma cacao
Thecc1EG041958 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40324889-40329888 Theobroma cacao
Thecc1EG041958 10.0kb upstream 10.0kb upstream 10840 true scaffold_9: 40329889-40340728 Theobroma cacao
Thecc1EG041958 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40330729-40340728 Theobroma cacao
Thecc1EG041958 10.0kb downstream 10.0kb downstream 10840 true scaffold_9: 40319889-40330728 Theobroma cacao
Thecc1EG041958 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40319889-40329888 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823739 5264 Brassicales-Malvales View MSA
124319802 5266 SBM View MSA
124248490 5268 Malvidae View MSA
124051168 5270 Rosid View MSA
123757988 5271 Pentapetalae View MSA
122778989 5272 Eudicot View MSA
122051321 5273 Angiosperm View MSA
121348698 5274 Embryophyte View MSA
123380978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain